RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 GBP3Q9H0R5 595 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 DBNDD1Q9H9R9 158 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 ARHGEF4Q9NR80 690 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 LRP2BPQ9P2M1 347 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 ZNF451Q9Y4E5 1061 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 TAF1P21675 1872 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 ERVV-1B6SEH8 477 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 SHOXO15266 292 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 ITGAVP06756 1048 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 CD247P20963 164 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 ETV3P41162 512 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 AUHQ13825 339 aaKnown RBP8.85□□□□□ -0.99
SVIP-204ENST00000530199 ADGRE1Q14246 886 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 MBTPS1Q14703 1052 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 FOXB2Q5VYV0 432 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 ADAT2Q7Z6V5 191 aaKnown RBP8.85□□□□□ -0.99
SVIP-204ENST00000530199 DZIP1LQ8IYY4 767 aaKnown RBP8.85□□□□□ -0.99
SVIP-204ENST00000530199 LRRN4CLQ8ND94 238 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 MYRFLQ96LU7 910 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 FBXL18Q96ME1 805 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 PTPN18Q99952 460 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 ASPNQ9BXN1 380 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 MYOZ2Q9NPC6 264 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
SVIP-204ENST00000530199 SIPA1L3O60292 1781 aaPredicted RBP8.84□□□□□ -0.99
SVIP-204ENST00000530199 CCDC163A0A0D9SF12 145 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 ECE2O60344 883 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 NTSR2O95665 410 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 BMP3P12645 472 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 PPP2R2AP63151 447 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 HSP90AA2PQ14568 343 aaPredicted RBP8.84□□□□□ -0.99
SVIP-204ENST00000530199 MTHFSDQ2M296 383 aaKnown RBP8.84□□□□□ -0.99
SVIP-204ENST00000530199 SLC10A5Q5PT55 438 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 SUSD4Q5VX71 490 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 ZNF227Q86WZ6 799 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 ARMC10Q8N2F6 343 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 U2AF1L4Q8WU68 220 aaKnown RBP8.84□□□□□ -0.99
SVIP-204ENST00000530199 RNF141Q8WVD5 230 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 UTP4Q969X6 686 aaKnown RBP8.84□□□□□ -0.99
SVIP-204ENST00000530199 PPP1R14AQ96A00 147 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 SCARF2Q96GP6 870 aaPredicted RBP8.84□□□□□ -0.99
SVIP-204ENST00000530199 EXOC2Q96KP1 924 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 WHRNQ9P202 907 aa8.84□□□□□ -0.99
SVIP-204ENST00000530199 UBN2Q6ZU65 1347 aa8.83□□□□□ -1
SVIP-204ENST00000530199 TRAV20A0A0B4J274 112 aa8.83□□□□□ -1
SVIP-204ENST00000530199 PPM1BO75688 479 aa8.83□□□□□ -1
SVIP-204ENST00000530199 SGPL1O95470 568 aa8.83□□□□□ -1
SVIP-204ENST00000530199 CCL5P13501 91 aa8.83□□□□□ -1
SVIP-204ENST00000530199 IBSPP21815 317 aaPredicted RBP8.83□□□□□ -1
SVIP-204ENST00000530199 MAP4P27816 1152 aaKnown RBP8.83□□□□□ -1
SVIP-204ENST00000530199 IL13P35225 146 aa8.83□□□□□ -1
SVIP-204ENST00000530199 TEFQ10587 303 aa8.83□□□□□ -1
SVIP-204ENST00000530199 YOD1Q5VVQ6 348 aaPredicted RBP8.83□□□□□ -1
SVIP-204ENST00000530199 BVESQ8NE79 360 aa8.83□□□□□ -1
SVIP-204ENST00000530199 KISS1RQ969F8 398 aaPredicted RBP8.83□□□□□ -1
SVIP-204ENST00000530199 MEGF10Q96KG7 1140 aa8.83□□□□□ -1
SVIP-204ENST00000530199 CDX2Q99626 313 aaPredicted RBP8.83□□□□□ -1
SVIP-204ENST00000530199 AARSD1Q9BTE6 412 aaKnown RBP8.83□□□□□ -1
SVIP-204ENST00000530199 LGR4Q9BXB1 951 aa8.83□□□□□ -1
SVIP-204ENST00000530199 GP6Q9HCN6 339 aa8.83□□□□□ -1
SVIP-204ENST00000530199 C1GALT1Q9NS00 363 aa8.83□□□□□ -1
SVIP-204ENST00000530199 ANGEL1Q9UNK9 670 aaKnown RBP8.83□□□□□ -1
SVIP-204ENST00000530199 PLAAQ9Y263 795 aa8.83□□□□□ -1
SVIP-204ENST00000530199 COL4A3BPQ9Y5P4 624 aa8.83□□□□□ -1
SVIP-204ENST00000530199 FAM205AQ6ZU69 1335 aa8.82□□□□□ -1
SVIP-204ENST00000530199 hCG_2014768A0A024R1R8 64 aa8.82□□□□□ -1
SVIP-204ENST00000530199 FAM95CA0A1B0GW59 222 aa8.82□□□□□ -1
SVIP-204ENST00000530199 CAPNS1P04632 268 aa8.82□□□□□ -1
SVIP-204ENST00000530199 L1CAMP32004 1257 aa8.82□□□□□ -1
SVIP-204ENST00000530199 MAGEA10P43363 369 aaPredicted RBP8.82□□□□□ -1
SVIP-204ENST00000530199 MASP1P48740 699 aa8.82□□□□□ -1
SVIP-204ENST00000530199 LACTBP83111 547 aaPredicted RBP8.82□□□□□ -1
SVIP-204ENST00000530199 CDK5R2Q13319 367 aa8.82□□□□□ -1
SVIP-204ENST00000530199 GRAPQ13588 217 aa8.82□□□□□ -1
SVIP-204ENST00000530199 NBPF9Q3BBW0 867 aa8.82□□□□□ -1
SVIP-204ENST00000530199 FAM20CQ8IXL6 584 aa8.82□□□□□ -1
SVIP-204ENST00000530199 GRAPLQ8TC17 118 aaPredicted RBP8.82□□□□□ -1
SVIP-204ENST00000530199 RCC1LQ96I51 464 aaKnown RBP8.82□□□□□ -1
SVIP-204ENST00000530199 CDC6Q99741 560 aa8.82□□□□□ -1
SVIP-204ENST00000530199 DHRS4Q9BTZ2 278 aa8.82□□□□□ -1
SVIP-204ENST00000530199 C1QTNF1Q9BXJ1 281 aa8.82□□□□□ -1
SVIP-204ENST00000530199 SCAF8Q9UPN6 1271 aaKnown RBP8.82□□□□□ -1
SVIP-204ENST00000530199 NOP58Q9Y2X3 529 aaKnown RBP8.82□□□□□ -1
SVIP-204ENST00000530199 SUGT1Q9Y2Z0 365 aa8.82□□□□□ -1
SVIP-204ENST00000530199 SCN9AQ15858 1988 aa8.82□□□□□ -1
SVIP-204ENST00000530199 ALPK3Q96L96 1907 aa8.82□□□□□ -1
SVIP-204ENST00000530199 EOMESO95936 686 aa8.81□□□□□ -1
SVIP-204ENST00000530199 SNRPA1P09661 255 aaKnown RBP8.81□□□□□ -1
SVIP-204ENST00000530199 ITGA4P13612 1032 aa8.81□□□□□ -1
SVIP-204ENST00000530199 CDK11BP21127 795 aaKnown RBP8.81□□□□□ -1
SVIP-204ENST00000530199 IGBP1P78318 339 aa8.81□□□□□ -1
SVIP-204ENST00000530199 KIF22Q14807 665 aa8.81□□□□□ -1
SVIP-204ENST00000530199 FAM209AQ5JX71 171 aa8.81□□□□□ -1
SVIP-204ENST00000530199 TXNRD3Q86VQ6 643 aa8.81□□□□□ -1
SVIP-204ENST00000530199 SCUBE1Q8IWY4 988 aa8.81□□□□□ -1
SVIP-204ENST00000530199 ZNF34Q8IZ26 560 aa8.81□□□□□ -1
SVIP-204ENST00000530199 TOP6BLQ8N6T0 577 aa8.81□□□□□ -1
SVIP-204ENST00000530199 IL17REQ8NFR9 667 aa8.81□□□□□ -1
SVIP-204ENST00000530199 MRGPRX3Q96LB0 322 aa8.81□□□□□ -1
SVIP-204ENST00000530199 EYA3Q99504 573 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms