RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 AGO4Q9HCK5 861 aaKnown RBP16.18■□□□□ 0.18
CAPN1-212ENST00000527887 TUBE1Q9UJT0 475 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 TRIP12Q14669 1992 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-212ENST00000527887 ARHGEF15O94989 841 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 ATG7O95352 703 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 CTSHP09668 335 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 ARP10275 920 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 STAT5BP51692 787 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 ACTR2P61160 394 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.17■□□□□ 0.18
CAPN1-212ENST00000527887 MYOCDQ8IZQ8 938 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 CYP2W1Q8TAV3 490 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 RNF26Q9BY78 433 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-212ENST00000527887 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
CAPN1-212ENST00000527887 PKD2L1Q9P0L9 805 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 COG5Q9UP83 839 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 SQORQ9Y6N5 450 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 MYO9BQ13459 2157 aa16.17■□□□□ 0.18
CAPN1-212ENST00000527887 LCHNA4D1U4 455 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 LINC01553A4QN01 128 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 EPOPA6NHQ4 379 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 RFXAPO00287 272 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 CPA1P15085 419 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 IFNAR1P17181 557 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 MARK3P27448 753 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 GRB10Q13322 594 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 MARCH8Q5T0T0 291 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 IER5Q5VY09 327 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 TMCO2Q7Z6W1 182 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-212ENST00000527887 NME8Q8N427 588 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 IL27Q8NEV9 243 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 CCDC148Q8NFR7 591 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-212ENST00000527887 CRYGNQ8WXF5 182 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 PCYT2Q99447 389 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 PRDM6Q9NQX0 595 aa16.16■□□□□ 0.18
CAPN1-212ENST00000527887 IGKV6D-21A0A0A0MT36 114 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 LPXNO60711 386 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 CHRNA1P02708 482 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 INSRRP14616 1297 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 SETQ01105 290 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-212ENST00000527887 MGAT3Q09327 533 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 ITGB3BPQ13352 177 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-212ENST00000527887 PKN1Q16512 942 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 JAKMIP3Q5VZ66 844 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 RUFY3Q7L099 469 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 REXO1Q8N1G1 1221 aaKnown RBP16.15■□□□□ 0.18
CAPN1-212ENST00000527887 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 PGBD1Q96JS3 809 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 TM6SF1Q9BZW5 370 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 SUGCTQ9HAC7 445 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 TBC1D22BQ9NU19 505 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 TMEM260Q9NX78 707 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 PCDHA2Q9Y5H9 948 aa16.15■□□□□ 0.18
CAPN1-212ENST00000527887 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-212ENST00000527887 HBP1O60381 514 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 PDIA3P30101 505 aaKnown RBP16.14■□□□□ 0.17
CAPN1-212ENST00000527887 SKIV2LQ15477 1246 aaKnown RBP16.14■□□□□ 0.17
CAPN1-212ENST00000527887 NTRK3Q16288 839 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 FAM160B1Q5W0V3 765 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 FAM117BQ6P1L5 589 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 ABHD15Q6UXT9 468 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 RUFY4Q6ZNE9 571 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 PLA2G4DQ86XP0 818 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 FAM177A1Q8N128 213 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-212ENST00000527887 DNAJB3Q8WWF6 145 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 YME1L1Q96TA2 773 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 SH3GLB2Q9NR46 395 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 TRPC6Q9Y210 931 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 GBF1Q92538 1859 aa16.14■□□□□ 0.17
CAPN1-212ENST00000527887 XIRP2A4UGR9 3374 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 IGLV3-22A0A075B6J6 115 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 SMIM35A0A1B0GVV1 85 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 POTEB3A0JP26 581 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 FAM86B1E9PN63 330 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 M0QZ92 97 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 IPO5O00410 1097 aaKnown RBP16.13■□□□□ 0.17
CAPN1-212ENST00000527887 FAM86B2P0C5J1 330 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 GHRP10912 638 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 CIITAP33076 1130 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 MRPS6P82932 125 aaKnown RBP16.13■□□□□ 0.17
CAPN1-212ENST00000527887 PLCB4Q15147 1175 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 MIS18BP1Q6P0N0 1132 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 POTEBQ6S5H4 581 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 TSHZ1Q6ZSZ6 1077 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 ZNF274Q96GC6 653 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-212ENST00000527887 FTHL17Q9BXU8 183 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 C22orf23Q9BZE7 217 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 TCEAL9Q9UHQ7 104 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 CYP46A1Q9Y6A2 500 aa16.13■□□□□ 0.17
CAPN1-212ENST00000527887 TNFRSF10AO00220 468 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 DHX15O43143 795 aaKnown RBP16.12■□□□□ 0.17
CAPN1-212ENST00000527887 USP11P51784 963 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 IGBP1P78318 339 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 LPIN1Q14693 890 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 FBXO47Q5MNV8 452 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 ZNF746Q6NUN9 644 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-212ENST00000527887 CPLX2Q6PUV4 134 aaKnown RBP16.12■□□□□ 0.17
CAPN1-212ENST00000527887 SMAP1Q8IYB5 467 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms