RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 IL17RAQ96F46 866 aa11.04□□□□□ -0.64
CNKSR1-209ENST00000524529 JAKMIP1Q96N16 626 aaKnown RBP11.04□□□□□ -0.64
CNKSR1-209ENST00000524529 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
CNKSR1-209ENST00000524529 LMCD1Q9NZU5 365 aa11.04□□□□□ -0.64
CNKSR1-209ENST00000524529 ZNF215Q9UL58 517 aaPredicted RBP11.04□□□□□ -0.64
CNKSR1-209ENST00000524529 SPDYE3A6NKU9 549 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 STXBP3O00186 592 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 UPP2O95045 317 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 GHRP10912 638 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 GNAT1P11488 350 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 ITGB3BPQ13352 177 aaPredicted RBP11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 LPIN1Q14693 890 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 GRIK4Q16099 956 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 RTN1Q16799 776 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 EPC2Q52LR7 807 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 GIMAP8Q8ND71 665 aaPredicted RBP11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 DNAJB3Q8WWF6 145 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 LINC01599Q8WXQ3 324 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 KHSRPQ92945 711 aaKnown RBP eCLIP11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 HLA-CQ95604 372 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 MXRA8Q9BRK3 442 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 ANO3Q9BYT9 981 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 IFIH1Q9BYX4 1025 aaKnown RBP11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 KCNH7Q9NS40 1196 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 TMEM260Q9NX78 707 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 COG5Q9UP83 839 aa11.03□□□□□ -0.64
CNKSR1-209ENST00000524529 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 INSRRP14616 1297 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 CLK2P49760 499 aaKnown RBP11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 NAPAP54920 295 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 AAK1Q2M2I8 961 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 BLOC1S2Q6QNY1 142 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 FBXL16Q8N461 479 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 CDHR1Q96JP9 859 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 C22orf23Q9BZE7 217 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 AGO3Q9H9G7 860 aaKnown RBP11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 RC3H2Q9HBD1 1191 aaKnown RBP11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 ZSWIM6Q9HCJ5 1215 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 CD320Q9NPF0 282 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 RIC8AQ9NPQ8 531 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 RBM28Q9NW13 759 aaKnown RBP11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 TUBE1Q9UJT0 475 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 CYP46A1Q9Y6A2 500 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 CDY2AQ9Y6F7 541 aa11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 FNDC1Q4ZHG4 1894 aaPredicted RBP11.02□□□□□ -0.65
CNKSR1-209ENST00000524529 KLF18A0A0U1RQI7 1052 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 MAFGO15525 162 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 ZBTB43O43298 467 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 CCNE2O96020 404 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 RPS6KB1P23443 525 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 ADD1P35611 737 aaKnown RBP11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 RBM25P49756 843 aaKnown RBP11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 ACTR2P61160 394 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 IGBP1P78318 339 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 PLCB4Q15147 1175 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 FBXO47Q5MNV8 452 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 TAF2Q6P1X5 1199 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 RUFY3Q7L099 469 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 RTN4RL1Q86UN2 441 aaPredicted RBP11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 TRAPPC12Q8WVT3 735 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 CRYGNQ8WXF5 182 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 APBB2Q92870 758 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 GLG1Q92896 1179 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 YME1L1Q96TA2 773 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 EPHX3Q9H6B9 360 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 UBE2ZQ9H832 354 aaPredicted RBP11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 AGO4Q9HCK5 861 aaKnown RBP11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 JPH1Q9HDC5 661 aaPredicted RBP11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 BARHL2Q9NY43 387 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 SLC9A2Q9UBY0 812 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 NFASCO94856 1347 aa11.01□□□□□ -0.65
CNKSR1-209ENST00000524529 PLXNA4Q9HCM2 1894 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 IGKV6D-21A0A0A0MT36 114 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 SMCO2A6NFE2 343 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 GOLGA8AA7E2F4 631 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 GOLGA8BA8MQT2 603 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 FAM86B1E9PN63 330 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 H3BNC9 293 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 MEIS1O00470 390 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 ENPP3O14638 875 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 DHX15O43143 795 aaKnown RBP11□□□□□ -0.65
CNKSR1-209ENST00000524529 EDIL3O43854 480 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 ATG7O95352 703 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 FAM86B2P0C5J1 330 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
CNKSR1-209ENST00000524529 SREBF1P36956 1147 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 PKN1Q16512 942 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 CEP55Q53EZ4 464 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 PPP1R18Q6NYC8 613 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 SYNE3Q6ZMZ3 975 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 TMEM192Q8IY95 271 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 CRIPAKQ8N1N5 446 aa11□□□□□ -0.65
CNKSR1-209ENST00000524529 ZNF689Q96CS4 500 aaPredicted RBP11□□□□□ -0.65
CNKSR1-209ENST00000524529 MRPL38Q96DV4 380 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms