RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 DBN1Q16643 649 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 ASRGL1Q7L266 308 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 TRIM31Q9BZY9 425 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 INTS9Q9NV88 658 aaKnown RBP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 LNPEPQ9UIQ6 1025 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 ABCC12Q96J65 1359 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 LRRC53A6NM62 1247 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 MTIF2P46199 727 aaKnown RBP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 DYNC1I2Q13409 638 aaKnown RBP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 TCIRG1Q13488 830 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 LRRC14Q15048 493 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 ENOX2Q16206 610 aaKnown RBP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 PABPC1LQ4VXU2 614 aaKnown RBP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 UBAP2Q5T6F2 1119 aaKnown RBP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 CCNJLQ8IV13 435 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 SYNE4Q8N205 404 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 CCDC155Q8N6L0 562 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 FITM2Q8N6M3 262 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 MGARPQ8TDB4 240 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 CNOT6LQ96LI5 555 aaKnown RBP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 DDX23Q9BUQ8 820 aaKnown RBP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 AZI2Q9H6S1 392 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 RNPEPL1Q9HAU8 725 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 FGFR1OP2Q9NVK5 253 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.1□□□□□ -0.63
SPIDR-224ENST00000524126 RHBDL2Q9NX52 303 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 PAPPAQ13219 1627 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 SLIT2O94813 1529 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 hCG_2014768A0A024R1R8 64 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 PRDM1O75626 825 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 SPATA31D3P0C874 917 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 TPBGLP0DKB5 382 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 GBP1P32455 592 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 ZNF131P52739 623 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 CDK17Q00537 523 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 MTMR3Q13615 1198 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 CUL1Q13616 776 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 MIIPQ5JXC2 388 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 SPATA31D4Q6ZUB0 917 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 RRAGAQ7L523 313 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 UHMK1Q8TAS1 419 aaKnown RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 DUSP9Q99956 384 aaKnown RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 ZKSCAN3Q9BRR0 538 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 NOC4LQ9BVI4 516 aaKnown RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 CELF4Q9BZC1 486 aaKnown RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 ANAPC4Q9UJX5 808 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 PLAGL2Q9UPG8 496 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 SLC12A7Q9Y666 1083 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 WNK3Q9BYP7 1800 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 ARFGEF2Q9Y6D5 1785 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 WDR19Q8NEZ3 1342 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 GRID2IPA4D2P6 1211 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 KCNK3O14649 394 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 PJA2O43164 708 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 OAS1P00973 400 aaKnown RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 IFNAR1P17181 557 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 CALB2P22676 271 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 MMP13P45452 471 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 SERPINB4P48594 390 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 INHBCP55103 352 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 NEXNQ0ZGT2 675 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 ZC2HC1CQ53FD0 456 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 LMBR1LQ6UX01 489 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 ATG9AQ7Z3C6 839 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 SDCCAG8Q86SQ7 713 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 CSGALNACT2Q8N6G5 542 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 TTC8Q8TAM2 541 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 DNAJC9Q8WXX5 260 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 RMDN2Q96LZ7 410 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 LBHD1Q9BQE6 289 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 METTL22Q9BUU2 404 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 KRT23Q9C075 422 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 CCDC113Q9H0I3 377 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 RMI1Q9H9A7 625 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 CWC25Q9NXE8 425 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 RNF14Q9UBS8 474 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 USP15Q9Y4E8 981 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-224ENST00000524126 TNS2Q63HR2 1409 aa11.09□□□□□ -0.63
SPIDR-224ENST00000524126 ABLIM1O14639 778 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 ITGA4P13612 1032 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 GSTT1P30711 240 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 PTDSS1P48651 473 aaKnown RBP11.08□□□□□ -0.64
SPIDR-224ENST00000524126 SESN3P58005 492 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 SCARF1Q14162 830 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 LRRC24Q50LG9 513 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 GALNT17Q6IS24 598 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 TTI2Q6NXR4 508 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 STAG2Q8N3U4 1231 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 OPTNQ96CV9 577 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 ZNF594Q96JF6 807 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-224ENST00000524126 IFT74Q96LB3 600 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 CCDC85AQ96PX6 553 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-224ENST00000524126 MOV10L1Q9BXT6 1211 aaKnown RBP11.08□□□□□ -0.64
SPIDR-224ENST00000524126 ETNK1Q9HBU6 452 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 MLXIPLQ9NP71 852 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 AMACRQ9UHK6 382 aa11.08□□□□□ -0.64
SPIDR-224ENST00000524126 ZBTB1Q9Y2K1 713 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms