RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 FAM86B2P0C5J1 330 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 INSRRP14616 1297 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 PDIA3P30101 505 aaKnown RBP23.59■■□□□ 1.37
SDCBP-209ENST00000522243 MKRN4PQ13434 485 aaPredicted RBP23.59■■□□□ 1.37
SDCBP-209ENST00000522243 FAM26DQ5JW98 314 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 RUFY3Q7L099 469 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 DNAJB3Q8WWF6 145 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 LARP6Q9BRS8 491 aaKnown RBP23.59■■□□□ 1.37
SDCBP-209ENST00000522243 SLC26A6Q9BXS9 759 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 THEGQ9P2T0 379 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 MTUS1Q9ULD2 1270 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 MTCH2Q9Y6C9 303 aa23.59■■□□□ 1.37
SDCBP-209ENST00000522243 GRB10Q13322 594 aa23.58■■□□□ 1.37
SDCBP-209ENST00000522243 TOB2Q14106 344 aaPredicted RBP23.58■■□□□ 1.37
SDCBP-209ENST00000522243 MARCH8Q5T0T0 291 aa23.58■■□□□ 1.37
SDCBP-209ENST00000522243 TAF2Q6P1X5 1199 aa23.58■■□□□ 1.37
SDCBP-209ENST00000522243 RASGRP4Q8TDF6 673 aa23.58■■□□□ 1.37
SDCBP-209ENST00000522243 CCDC12Q8WUD4 166 aaPredicted RBP23.58■■□□□ 1.37
SDCBP-209ENST00000522243 ZSWIM6Q9HCJ5 1215 aa23.58■■□□□ 1.37
SDCBP-209ENST00000522243 TRPC6Q9Y210 931 aa23.58■■□□□ 1.37
SDCBP-209ENST00000522243 CHD9Q3L8U1 2897 aa23.57■■□□□ 1.36
SDCBP-209ENST00000522243 UPP2O95045 317 aa23.57■■□□□ 1.36
SDCBP-209ENST00000522243 GHRP10912 638 aa23.57■■□□□ 1.36
SDCBP-209ENST00000522243 STAT5BP51692 787 aa23.57■■□□□ 1.36
SDCBP-209ENST00000522243 PLCB4Q15147 1175 aa23.57■■□□□ 1.36
SDCBP-209ENST00000522243 REXO1Q8N1G1 1221 aaKnown RBP23.57■■□□□ 1.36
SDCBP-209ENST00000522243 TRAPPC12Q8WVT3 735 aa23.57■■□□□ 1.36
SDCBP-209ENST00000522243 CRYGNQ8WXF5 182 aa23.57■■□□□ 1.36
SDCBP-209ENST00000522243 RNF26Q9BY78 433 aaPredicted RBP23.57■■□□□ 1.36
SDCBP-209ENST00000522243 IFIH1Q9BYX4 1025 aaKnown RBP23.57■■□□□ 1.36
SDCBP-209ENST00000522243 FAM49AQ9H0Q0 323 aaPredicted RBP23.57■■□□□ 1.36
SDCBP-209ENST00000522243 VPS54Q9P1Q0 977 aa23.57■■□□□ 1.36
SDCBP-209ENST00000522243 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.56■■□□□ 1.36
SDCBP-209ENST00000522243 MBLAC1A4D2B0 266 aaPredicted RBP23.56■■□□□ 1.36
SDCBP-209ENST00000522243 LINC01553A4QN01 128 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 EPB41L2O43491 1005 aaKnown RBP23.56■■□□□ 1.36
SDCBP-209ENST00000522243 CCNE2O96020 404 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 GNA11P29992 359 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 EVCP57679 992 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 MGAT3Q09327 533 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 SKIV2LQ15477 1246 aaKnown RBP23.56■■□□□ 1.36
SDCBP-209ENST00000522243 TJAP1Q5JTD0 557 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 NIPA1Q7RTP0 329 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 RPAINQ86UA6 219 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 RSPH3Q86UC2 560 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 GDPD5Q8WTR4 605 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 UPF3BQ9BZI7 483 aaKnown RBP23.56■■□□□ 1.36
SDCBP-209ENST00000522243 INSL6Q9Y581 213 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 CYP46A1Q9Y6A2 500 aa23.56■■□□□ 1.36
SDCBP-209ENST00000522243 UNC80Q8N2C7 3258 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 IGLV3-22A0A075B6J6 115 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 RRN3P2A6NIE6 340 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 LPXNO60711 386 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 ATG7O95352 703 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 CYP3A4P08684 503 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 IFNAR1P17181 557 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 POU3F3P20264 500 aaPredicted RBP23.55■■□□□ 1.36
SDCBP-209ENST00000522243 PLPPR4Q7Z2D5 763 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 APBB2Q92870 758 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 TGS1Q96RS0 853 aaKnown RBP23.55■■□□□ 1.36
SDCBP-209ENST00000522243 CDY2AQ9Y6F7 541 aa23.55■■□□□ 1.36
SDCBP-209ENST00000522243 BACH1O14867 736 aa23.54■■□□□ 1.36
SDCBP-209ENST00000522243 ERVK-21P61565 698 aa23.54■■□□□ 1.36
SDCBP-209ENST00000522243 LPIN1Q14693 890 aa23.54■■□□□ 1.36
SDCBP-209ENST00000522243 ATXN2LQ8WWM7 1075 aaKnown RBP23.54■■□□□ 1.36
SDCBP-209ENST00000522243 SYMPKQ92797 1274 aaKnown RBP23.54■■□□□ 1.36
SDCBP-209ENST00000522243 TOP1MTQ969P6 601 aa23.54■■□□□ 1.36
SDCBP-209ENST00000522243 TSPYL2Q9H2G4 693 aaPredicted RBP23.54■■□□□ 1.36
SDCBP-209ENST00000522243 SUGCTQ9HAC7 445 aa23.54■■□□□ 1.36
SDCBP-209ENST00000522243 PRRC2BQ5JSZ5 2229 aaKnown RBP23.53■■□□□ 1.36
SDCBP-209ENST00000522243 POTEB3A0JP26 581 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 IPO5O00410 1097 aaKnown RBP23.53■■□□□ 1.36
SDCBP-209ENST00000522243 DHX15O43143 795 aaKnown RBP23.53■■□□□ 1.36
SDCBP-209ENST00000522243 HTRA4P83105 476 aaPredicted RBP23.53■■□□□ 1.36
SDCBP-209ENST00000522243 TMEM62Q0P6H9 643 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 STK3Q13188 491 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 MCTP2Q6DN12 878 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 POTEBQ6S5H4 581 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 ABHD15Q6UXT9 468 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 CCDC148Q8NFR7 591 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 ASB2Q96Q27 587 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 ZNF577Q9BSK1 485 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 LOXHD1Q8IVV2 1947 aa23.53■■□□□ 1.36
SDCBP-209ENST00000522243 IGKV6D-21A0A0A0MT36 114 aa23.52■■□□□ 1.36
SDCBP-209ENST00000522243 MRPS6P82932 125 aaKnown RBP23.52■■□□□ 1.36
SDCBP-209ENST00000522243 PRR16Q569H4 304 aa23.52■■□□□ 1.36
SDCBP-209ENST00000522243 CCDC60Q8IWA6 550 aaPredicted RBP23.52■■□□□ 1.36
SDCBP-209ENST00000522243 BICD2Q8TD16 824 aa23.52■■□□□ 1.36
SDCBP-209ENST00000522243 TNPO1Q92973 898 aaKnown RBP23.52■■□□□ 1.36
SDCBP-209ENST00000522243 YME1L1Q96TA2 773 aa23.52■■□□□ 1.36
SDCBP-209ENST00000522243 C17orf80Q9BSJ5 609 aa23.52■■□□□ 1.36
SDCBP-209ENST00000522243 PPP4R2Q9NY27 417 aa23.52■■□□□ 1.36
SDCBP-209ENST00000522243 NLRP5P59047 1200 aa23.51■■□□□ 1.35
SDCBP-209ENST00000522243 MRPS5P82675 430 aaKnown RBP23.51■■□□□ 1.35
SDCBP-209ENST00000522243 TFF2Q03403 129 aa23.51■■□□□ 1.35
SDCBP-209ENST00000522243 SSRP1Q08945 709 aaKnown RBP23.51■■□□□ 1.35
SDCBP-209ENST00000522243 FBXO47Q5MNV8 452 aa23.51■■□□□ 1.35
SDCBP-209ENST00000522243 FAM160B1Q5W0V3 765 aa23.51■■□□□ 1.35
SDCBP-209ENST00000522243 SWSAP1Q6NVH7 229 aa23.51■■□□□ 1.35
SDCBP-209ENST00000522243 TM6SF1Q9BZW5 370 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms