RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SLC9A2Q9UBY0 812 aa22.46■■□□□ 1.19
PABPC1-215ENST00000520804 SMCO2A6NFE2 343 aa22.45■■□□□ 1.18
PABPC1-215ENST00000520804 GOLGA8AA7E2F4 631 aa22.45■■□□□ 1.18
PABPC1-215ENST00000520804 GOLGA8BA8MQT2 603 aa22.45■■□□□ 1.18
PABPC1-215ENST00000520804 HMGB1P09429 215 aaKnown RBP22.45■■□□□ 1.18
PABPC1-215ENST00000520804 GHRP10912 638 aa22.45■■□□□ 1.18
PABPC1-215ENST00000520804 RCAN1P53805 252 aa22.45■■□□□ 1.18
PABPC1-215ENST00000520804 DNAJB3Q8WWF6 145 aa22.45■■□□□ 1.18
PABPC1-215ENST00000520804 ANO3Q9BYT9 981 aa22.45■■□□□ 1.18
PABPC1-215ENST00000520804 NFASCO94856 1347 aa22.45■■□□□ 1.18
PABPC1-215ENST00000520804 RRN3P2A6NIE6 340 aa22.44■■□□□ 1.18
PABPC1-215ENST00000520804 ARP10275 920 aa22.44■■□□□ 1.18
PABPC1-215ENST00000520804 CDC27P30260 824 aa22.44■■□□□ 1.18
PABPC1-215ENST00000520804 CLK2P49760 499 aaKnown RBP22.44■■□□□ 1.18
PABPC1-215ENST00000520804 LPIN1Q14693 890 aa22.44■■□□□ 1.18
PABPC1-215ENST00000520804 EPC2Q52LR7 807 aa22.44■■□□□ 1.18
PABPC1-215ENST00000520804 CEP55Q53EZ4 464 aa22.44■■□□□ 1.18
PABPC1-215ENST00000520804 SDF4Q9BRK5 362 aa22.44■■□□□ 1.18
PABPC1-215ENST00000520804 GLT8D2Q9H1C3 349 aa22.44■■□□□ 1.18
PABPC1-215ENST00000520804 AZI2Q9H6S1 392 aa22.44■■□□□ 1.18
PABPC1-215ENST00000520804 AGO4Q9HCK5 861 aaKnown RBP22.44■■□□□ 1.18
PABPC1-215ENST00000520804 INSRRP14616 1297 aa22.43■■□□□ 1.18
PABPC1-215ENST00000520804 ACTR2P61160 394 aa22.43■■□□□ 1.18
PABPC1-215ENST00000520804 IGBP1P78318 339 aa22.43■■□□□ 1.18
PABPC1-215ENST00000520804 AP3B2Q13367 1082 aa22.43■■□□□ 1.18
PABPC1-215ENST00000520804 TMEM260Q9NX78 707 aa22.43■■□□□ 1.18
PABPC1-215ENST00000520804 MEIS1O00470 390 aa22.42■■□□□ 1.18
PABPC1-215ENST00000520804 RPLP2P05387 115 aaKnown RBP22.42■■□□□ 1.18
PABPC1-215ENST00000520804 SREBF1P36956 1147 aa22.42■■□□□ 1.18
PABPC1-215ENST00000520804 ITGB3BPQ13352 177 aaPredicted RBP22.42■■□□□ 1.18
PABPC1-215ENST00000520804 FBXO47Q5MNV8 452 aa22.42■■□□□ 1.18
PABPC1-215ENST00000520804 PLPPR4Q7Z2D5 763 aa22.42■■□□□ 1.18
PABPC1-215ENST00000520804 KCNB2Q92953 911 aa22.42■■□□□ 1.18
PABPC1-215ENST00000520804 TNPO1Q92973 898 aaKnown RBP22.42■■□□□ 1.18
PABPC1-215ENST00000520804 ZBTB10Q96DT7 871 aa22.42■■□□□ 1.18
PABPC1-215ENST00000520804 CDY2AQ9Y6F7 541 aa22.42■■□□□ 1.18
PABPC1-215ENST00000520804 CPA1P15085 419 aa22.41■■□□□ 1.18
PABPC1-215ENST00000520804 ADD1P35611 737 aaKnown RBP22.41■■□□□ 1.18
PABPC1-215ENST00000520804 STAT5BP51692 787 aa22.41■■□□□ 1.18
PABPC1-215ENST00000520804 MRPS6P82932 125 aaKnown RBP22.41■■□□□ 1.18
PABPC1-215ENST00000520804 FGD1P98174 961 aa22.41■■□□□ 1.18
PABPC1-215ENST00000520804 PLCB4Q15147 1175 aa22.41■■□□□ 1.18
PABPC1-215ENST00000520804 PTPROQ16827 1216 aa22.41■■□□□ 1.18
PABPC1-215ENST00000520804 PFKFB3Q16875 520 aaPredicted RBP22.41■■□□□ 1.18
PABPC1-215ENST00000520804 TMEM192Q8IY95 271 aa22.41■■□□□ 1.18
PABPC1-215ENST00000520804 MRPL38Q96DV4 380 aaKnown RBP22.41■■□□□ 1.18
PABPC1-215ENST00000520804 IL17RAQ96F46 866 aa22.41■■□□□ 1.18
PABPC1-215ENST00000520804 NAP1L2Q9ULW6 460 aaPredicted RBP22.41■■□□□ 1.18
PABPC1-215ENST00000520804 TRPC6Q9Y210 931 aa22.41■■□□□ 1.18
PABPC1-215ENST00000520804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.4■■□□□ 1.18
PABPC1-215ENST00000520804 CCDC196A0A1B0GTZ2 297 aa22.4■■□□□ 1.18
PABPC1-215ENST00000520804 H3BNC9 293 aa22.4■■□□□ 1.18
PABPC1-215ENST00000520804 ENPP3O14638 875 aa22.4■■□□□ 1.18
PABPC1-215ENST00000520804 ATG7O95352 703 aa22.4■■□□□ 1.18
PABPC1-215ENST00000520804 METAP2P50579 478 aaKnown RBP eCLIP22.4■■□□□ 1.182e-36■□□□□ 11.2
PABPC1-215ENST00000520804 TSHZ1Q6ZSZ6 1077 aa22.4■■□□□ 1.18
PABPC1-215ENST00000520804 NIPA1Q7RTP0 329 aa22.4■■□□□ 1.18
PABPC1-215ENST00000520804 FAM49AQ9H0Q0 323 aaPredicted RBP22.4■■□□□ 1.18
PABPC1-215ENST00000520804 UBE2ZQ9H832 354 aaPredicted RBP22.4■■□□□ 1.18
PABPC1-215ENST00000520804 PCDHA2Q9Y5H9 948 aa22.4■■□□□ 1.18
PABPC1-215ENST00000520804 NLRC5Q86WI3 1866 aa22.4■■□□□ 1.18
PABPC1-215ENST00000520804 RALGAPA2Q2PPJ7 1873 aa22.39■■□□□ 1.18
PABPC1-215ENST00000520804 SCG2P13521 617 aa22.39■■□□□ 1.17
PABPC1-215ENST00000520804 HSPA4P34932 840 aa22.39■■□□□ 1.17
PABPC1-215ENST00000520804 ZNF76P36508 570 aa22.39■■□□□ 1.17
PABPC1-215ENST00000520804 APOBRQ0VD83 1088 aa22.39■■□□□ 1.17
PABPC1-215ENST00000520804 GPM6BQ13491 265 aa22.39■■□□□ 1.17
PABPC1-215ENST00000520804 IER5Q5VY09 327 aa22.39■■□□□ 1.17
PABPC1-215ENST00000520804 Q6ZUG5 572 aa22.39■■□□□ 1.17
PABPC1-215ENST00000520804 FIBCD1Q8N539 461 aa22.39■■□□□ 1.17
PABPC1-215ENST00000520804 AGO3Q9H9G7 860 aaKnown RBP22.39■■□□□ 1.17
PABPC1-215ENST00000520804 NCOR1O75376 2440 aa22.39■■□□□ 1.17
PABPC1-215ENST00000520804 IGKV6D-21A0A0A0MT36 114 aa22.38■■□□□ 1.17
PABPC1-215ENST00000520804 SLC26A2P50443 739 aa22.38■■□□□ 1.17
PABPC1-215ENST00000520804 JAKMIP3Q5VZ66 844 aa22.38■■□□□ 1.17
PABPC1-215ENST00000520804 TRAPPC12Q8WVT3 735 aa22.38■■□□□ 1.17
PABPC1-215ENST00000520804 JAKMIP1Q96N16 626 aaKnown RBP22.38■■□□□ 1.17
PABPC1-215ENST00000520804 RC3H2Q9HBD1 1191 aaKnown RBP22.38■■□□□ 1.17
PABPC1-215ENST00000520804 SNX14Q9Y5W7 946 aa22.38■■□□□ 1.17
PABPC1-215ENST00000520804 SQORQ9Y6N5 450 aa22.38■■□□□ 1.17
PABPC1-215ENST00000520804 NID2Q14112 1375 aa22.38■■□□□ 1.17
PABPC1-215ENST00000520804 ESYT2A0FGR8 921 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 POTEB3A0JP26 581 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 FAM86B1E9PN63 330 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 CCNE2O96020 404 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 FAM86B2P0C5J1 330 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 TIGD5Q53EQ6 642 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 BLOC1S2Q6QNY1 142 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 POTEBQ6S5H4 581 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 CRYGNQ8WXF5 182 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 BRF1Q92994 677 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 TRPV2Q9Y5S1 764 aa22.37■■□□□ 1.17
PABPC1-215ENST00000520804 ADGRA3Q8IWK6 1321 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 IGLV3-22A0A075B6J6 115 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 M0QZ92 97 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 DDX39AO00148 427 aaKnown RBP22.36■■□□□ 1.17
PABPC1-215ENST00000520804 CYP3A4P08684 503 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 CD52P31358 61 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 TMEM62Q0P6H9 643 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 ABHD15Q6UXT9 468 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms