RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 STPG3Q8N7X2 389 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 SEMA6DQ8NFY4 1073 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 NLGN2Q8NFZ4 835 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 OR14K1Q8NGZ2 314 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 ATXN2LQ8WWM7 1075 aaKnown RBP0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 SLC9A6Q92581 669 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 SCYL1Q96KG9 808 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 MIR1-1HGQ9H1L0 117 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 SLCO5A1Q9H2Y9 848 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 CCDC87Q9NVE4 849 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 ASB6Q9NWX5 421 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 DTLQ9NZJ0 730 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 LRIT1Q9P2V4 623 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 ZFP69BQ9UJL9 534 aa0.66□□□□□ -2.3
SNORA40.17-201ENST00000517256 COL4A3Q01955 1670 aa0.65□□□□□ -2.3
SNORA40.17-201ENST00000517256 IGKV3D-20A0A0C4DH25 116 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 CGB1A6NKQ9 187 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 CHURC1-FNTBB4DL54 471 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 PPEF2O14830 753 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 SGSM2O43147 1006 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 LPXNO60711 386 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 MFAP3LO75121 409 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 HMGCRP04035 888 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 CD1AP06126 327 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 PRG2P13727 222 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 CTSKP43235 329 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 SLC6A11P48066 632 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 SEPHS1P49903 392 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 KCNQ1P51787 676 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 MXRA7P84157 204 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 CHRNA2Q15822 529 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 DDB1Q16531 1140 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 C9orf50Q5SZB4 431 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 LCE1FQ5T754 118 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 RASIP1Q5U651 963 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 PIK3R6Q5UE93 754 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 TEPPQ6URK8 271 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 NXPE4Q6UWF7 544 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 KRTAP5-5Q701N2 237 aaPredicted RBP0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 RFX6Q8HWS3 928 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 GJD3Q8N144 294 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 FAM98AQ8NCA5 519 aaKnown RBP0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 WDR48Q8TAF3 677 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 GTF3C2Q8WUA4 911 aaPredicted RBP0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 SLC12A9Q9BXP2 914 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 KLK15Q9H2R5 256 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 SEMA4GQ9NTN9 838 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 RNF181Q9P0P0 153 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 PRO0461Q9UI25 63 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 COG6Q9Y2V7 657 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 SH3BP1Q9Y3L3 701 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 SMAD5-AS1Q9Y6J3 95 aa0.65□□□□□ -2.31
SNORA40.17-201ENST00000517256 CENPVL1A0A0U1RR11 272 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 EME2A4GXA9 379 aaPredicted RBP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ARID3CA6NKF2 412 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 IFITM10A6NMD0 228 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 C22orf46C9J442 243 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 H0Y8X5 98 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 GFRA2O00451 464 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 EIF1AYO14602 144 aaKnown RBP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 TNFRSF13BO14836 293 aaPredicted RBP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 CUTAO60888 179 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 CLASP2O75122 1294 aaKnown RBP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 MOSPD3O75425 235 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ABL1P00519 1130 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ALPLP05186 524 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 TYRP1P17643 537 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ATP2B4P23634 1241 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 GUCY1B3Q02153 619 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 DDR1Q08345 913 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 RAD51AP2Q09MP3 1159 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 RABEP1Q15276 862 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 NPY5RQ15761 445 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 MAP3K11Q16584 847 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 TSNAXIP1Q2TAA8 658 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 WDR72Q3MJ13 1102 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 LEXMQ3ZCV2 418 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ZNF585BQ52M93 769 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 RHBDF2Q6PJF5 856 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 USP30Q70CQ3 517 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 RHOUQ7L0Q8 258 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 TEX2Q8IWB9 1127 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 TMEM192Q8IY95 271 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 SLFN12Q8IYM2 578 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ZNF843Q8N446 348 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ZBTB38Q8NAP3 1195 aaPredicted RBP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 GAL3ST3Q96A11 431 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ZNF428Q96B54 188 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ARL8AQ96BM9 186 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 LYZL4Q96KX0 146 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 COQ10AQ96MF6 247 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 ZDHHC15Q96MV8 337 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 MNTQ99583 582 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 TACO1Q9BSH4 297 aaKnown RBP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 PPP1R12CQ9BZL4 782 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 KIAA1683Q9H0B3 1180 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 CPNE5Q9HCH3 593 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 IL17RBQ9NRM6 502 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 SLC17A6Q9P2U8 582 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms