RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 SPHKAPQ2M3C7 1700 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 ANKRD65E5RJM6 399 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 MEIS1O00470 390 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 DPYSL4O14531 572 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 GH2P01242 217 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 ADRA2BP18089 450 aa17.31■□□□□ 0.36
TRIM41-207ENST00000515223 APOBEC3FQ8IUX4 373 aaKnown RBP17.31■□□□□ 0.36
TRIM41-207ENST00000515223 ABCA6Q8N139 1617 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 ARHGEF18Q6ZSZ5 1173 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 OSBP2Q969R2 916 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 HEXIM2Q96MH2 286 aaKnown RBP17.3■□□□□ 0.36
TRIM41-207ENST00000515223 GOLGA8KD6RF30 607 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 PRPSAP2O60256 369 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 MAGOHBQ96A72 148 aaKnown RBP17.3■□□□□ 0.36
TRIM41-207ENST00000515223 DYNLL2Q96FJ2 89 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 WRNIP1Q96S55 665 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 ABCB6Q9NP58 842 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 ZHX2Q9Y6X8 837 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 MGEA5O60502 916 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 LDHAP00338 332 aaKnown RBP17.3■□□□□ 0.36
TRIM41-207ENST00000515223 JAK3P52333 1124 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 STX1BP61266 288 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 MAN2A1Q16706 1144 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 TMED8Q6PL24 325 aaPredicted RBP17.3■□□□□ 0.36
TRIM41-207ENST00000515223 GBP7Q8N8V2 638 aaPredicted RBP17.3■□□□□ 0.36
TRIM41-207ENST00000515223 AFF2P51816 1311 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 ZNF335Q9H4Z2 1342 aaPredicted RBP17.3■□□□□ 0.36
TRIM41-207ENST00000515223 CLIC2O15247 247 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 PRKAB2O43741 272 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 BNIP3LO60238 219 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 CPP00450 1065 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 C2orf54Q08AI8 447 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 MSTO1Q9BUK6 570 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 CLGNO14967 610 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 NR5A1Q13285 461 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 SUSD4Q5VX71 490 aa17.3■□□□□ 0.36
TRIM41-207ENST00000515223 FASTKD5Q7L8L6 764 aaKnown RBP17.3■□□□□ 0.36
TRIM41-207ENST00000515223 IQCA1LA6NCM1 817 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 MAP2K2P36507 400 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 EHHADHQ08426 723 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 CCDC38Q502W7 563 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 DCAF4Q8WV16 495 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 CRKP46108 304 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 TTC25Q96NG3 672 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 PUS7LQ9H0K6 701 aaKnown RBP17.29■□□□□ 0.36
TRIM41-207ENST00000515223 GLI2P10070 1586 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 ZBBXA8MT70 800 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 PHLDB3Q6NSJ2 640 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 CALN1Q9BXU9 219 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 ZCCHC17Q9NP64 241 aaKnown RBP17.29■□□□□ 0.36
TRIM41-207ENST00000515223 FNDC3AQ9Y2H6 1198 aaKnown RBP17.29■□□□□ 0.36
TRIM41-207ENST00000515223 USP17L5A8MUK1 530 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 LRRN2O75325 713 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 RNF10Q8N5U6 811 aaKnown RBP17.29■□□□□ 0.36
TRIM41-207ENST00000515223 NCOA3Q9Y6Q9 1424 aa17.29■□□□□ 0.36
TRIM41-207ENST00000515223 A0A1B0GUA9 196 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 ATXN8OSP0DMR3 200 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
TRIM41-207ENST00000515223 PSMD2Q13200 908 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 LRRC41Q15345 812 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 NUDCD1Q96RS6 583 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 EMILIN3Q9NT22 766 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 TLK1Q9UKI8 766 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 KRT1P04264 644 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 CD58P19256 250 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 RFC1P35251 1148 aaPredicted RBP17.28■□□□□ 0.36
TRIM41-207ENST00000515223 PTPN12Q05209 780 aaKnown RBP17.28■□□□□ 0.36
TRIM41-207ENST00000515223 MFSD14CQ5VZR4 134 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 OR6B3Q8NGW1 331 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 NARFQ9UHQ1 456 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 PRPF3O43395 683 aaKnown RBP17.28■□□□□ 0.36
TRIM41-207ENST00000515223 ZBTB7AO95365 584 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 AP3B2Q13367 1082 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 NAA35Q5VZE5 725 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 USP6P35125 1406 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 DENND3A2RUS2 1198 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 RASSF7Q02833 373 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 PRPF38AQ8NAV1 312 aaKnown RBP17.28■□□□□ 0.36
TRIM41-207ENST00000515223 ARAP3Q8WWN8 1544 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 TTC4O95801 387 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 PLA2G4BP0C869 781 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 IFNAR1P17181 557 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 BZW1Q7L1Q6 419 aaKnown RBP17.28■□□□□ 0.36
TRIM41-207ENST00000515223 KCTD6Q8NC69 237 aa17.28■□□□□ 0.36
TRIM41-207ENST00000515223 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
TRIM41-207ENST00000515223 CCDC151A5D8V7 595 aa17.27■□□□□ 0.36
TRIM41-207ENST00000515223 TNFAIP2Q03169 654 aa17.27■□□□□ 0.36
TRIM41-207ENST00000515223 DGKHQ86XP1 1220 aa17.27■□□□□ 0.36
TRIM41-207ENST00000515223 URGCPQ8TCY9 931 aa17.27■□□□□ 0.36
TRIM41-207ENST00000515223 LRRC8CQ8TDW0 803 aa17.27■□□□□ 0.36
TRIM41-207ENST00000515223 HOXA13P31271 388 aaPredicted RBP17.27■□□□□ 0.36
TRIM41-207ENST00000515223 TWF2Q6IBS0 349 aaKnown RBP17.27■□□□□ 0.36
TRIM41-207ENST00000515223 BAIAP2L1Q9UHR4 511 aa17.27■□□□□ 0.36
TRIM41-207ENST00000515223 UBE2SQ16763 222 aa17.27■□□□□ 0.35
TRIM41-207ENST00000515223 MCPH1Q8NEM0 835 aa17.27■□□□□ 0.35
TRIM41-207ENST00000515223 RMDN3Q96TC7 470 aa17.27■□□□□ 0.35
TRIM41-207ENST00000515223 UBE2TQ9NPD8 197 aaPredicted RBP17.27■□□□□ 0.35
TRIM41-207ENST00000515223 INPP5FQ9Y2H2 1132 aa17.27■□□□□ 0.35
TRIM41-207ENST00000515223 ZBTB22O15209 634 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms