RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 SPOUT1Q5T280 376 aaKnown RBP13.86□□□□□ -0.19
SMAD5-210ENST00000515005 ARHGEF16Q5VV41 709 aa13.86□□□□□ -0.19
SMAD5-210ENST00000515005 IFNL3Q8IZI9 196 aa13.86□□□□□ -0.19
SMAD5-210ENST00000515005 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
SMAD5-210ENST00000515005 LMBR1Q8WVP7 490 aa13.86□□□□□ -0.19
SMAD5-210ENST00000515005 RTKNQ9BST9 563 aa13.86□□□□□ -0.19
SMAD5-210ENST00000515005 AGO3Q9H9G7 860 aaKnown RBP13.86□□□□□ -0.19
SMAD5-210ENST00000515005 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
SMAD5-210ENST00000515005 NCDNQ9UBB6 729 aa13.86□□□□□ -0.19
SMAD5-210ENST00000515005 FNDC1Q4ZHG4 1894 aaPredicted RBP13.86□□□□□ -0.19
SMAD5-210ENST00000515005 PRR5-ARHGAP8B1AHC4 643 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 GPAA1O43292 621 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 MTHFRP42898 656 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 NOVP48745 357 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 ARHGAP8P85298 464 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 ARHGAP4P98171 946 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 PPARAQ07869 468 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 TDGQ13569 410 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 HSP90AB4PQ58FF6 505 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 RUFY4Q6ZNE9 571 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 THNSL1Q8IYQ7 743 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 CASP10Q92851 521 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 TCF25Q9BQ70 676 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 BCAS3Q9H6U6 928 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 CYP26B1Q9NR63 512 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 HCSTQ9UBK5 93 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 DUSP12Q9UNI6 340 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 LOXHD1Q8IVV2 1947 aa13.85□□□□□ -0.19
SMAD5-210ENST00000515005 KRBA1A5PL33 1030 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 M0R2C6 588 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 SLC3A2P08195 630 aaKnown RBP13.84□□□□□ -0.19
SMAD5-210ENST00000515005 STAG3L1P0CL83 205 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 UBA1P22314 1058 aaKnown RBP13.84□□□□□ -0.19
SMAD5-210ENST00000515005 CD52P31358 61 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 LMNB2Q03252 620 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 SPECC1Q5M775 1068 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 KANK3Q6NY19 840 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 TSHZ1Q6ZSZ6 1077 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 GPR161Q8N6U8 529 aaKnown RBP13.84□□□□□ -0.19
SMAD5-210ENST00000515005 C12orf76Q8N812 135 aaPredicted RBP13.84□□□□□ -0.19
SMAD5-210ENST00000515005 GPKOWQ92917 476 aaPredicted RBP eCLIP13.84□□□□□ -0.19
SMAD5-210ENST00000515005 KIF1BPQ96EK5 621 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 MLXIPQ9HAP2 919 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 AAASQ9NRG9 546 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
SMAD5-210ENST00000515005 USTQ9Y2C2 406 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMAD5-210ENST00000515005 HCFC2Q9Y5Z7 792 aa13.84□□□□□ -0.19
SMAD5-210ENST00000515005 CEP295Q9C0D2 2601 aa13.83□□□□□ -0.19
SMAD5-210ENST00000515005 DOCK5Q9H7D0 1870 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 PATL2C9JE40 543 aaKnown RBP13.83□□□□□ -0.2
SMAD5-210ENST00000515005 KINO60870 393 aaKnown RBP13.83□□□□□ -0.2
SMAD5-210ENST00000515005 EOMESO95936 686 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 DCNP07585 359 aaKnown RBP13.83□□□□□ -0.2
SMAD5-210ENST00000515005 GNAT2P19087 354 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.2
SMAD5-210ENST00000515005 DMWDQ09019 674 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 TBC1D8BQ0IIM8 1120 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 PPM1JQ5JR12 505 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 RARS2Q5T160 578 aaKnown RBP13.83□□□□□ -0.2
SMAD5-210ENST00000515005 TRIM50Q86XT4 487 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 COLGALT1Q8NBJ5 622 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 FEZF2Q8TBJ5 459 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 APPBP2Q92624 585 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 ENTPD7Q9NQZ7 604 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 PXMP2Q9NR77 195 aa13.83□□□□□ -0.2
SMAD5-210ENST00000515005 FRYQ5TBA9 3013 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 DENND4AQ7Z401 1863 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 ANP32CO43423 234 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 NARSO43776 548 aaKnown RBP13.82□□□□□ -0.2
SMAD5-210ENST00000515005 CFHP08603 1231 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 PDHBP11177 359 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 MYCLP12524 364 aaPredicted RBP13.82□□□□□ -0.2
SMAD5-210ENST00000515005 SCG2P13521 617 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 C1orf210Q8IVY1 113 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 TMEM47Q9BQJ4 181 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 CPVLQ9H3G5 476 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 TBC1D17Q9HA65 648 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 KCNK12Q9HB15 430 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 CDY2AQ9Y6F7 541 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
SMAD5-210ENST00000515005 POTEMA6NI47 508 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 RANBP6O60518 1105 aaKnown RBP13.81□□□□□ -0.2
SMAD5-210ENST00000515005 RFX1P22670 979 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 TGM1P22735 817 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 CTDSPL2Q05D32 466 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 ATAT1Q5SQI0 421 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 KIAA1841Q6NSI8 718 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 KCNV1Q6PIU1 500 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 POTEGQ6S5H5 508 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 MAML2Q8IZL2 1156 aaPredicted RBP13.81□□□□□ -0.2
SMAD5-210ENST00000515005 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 MRPS27Q92552 414 aaKnown RBP13.81□□□□□ -0.2
SMAD5-210ENST00000515005 ZFP91Q96JP5 570 aaPredicted RBP13.81□□□□□ -0.2
SMAD5-210ENST00000515005 USP26Q9BXU7 913 aa13.81□□□□□ -0.2
SMAD5-210ENST00000515005 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms