RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 IL17RAQ96F46 866 aa10.63□□□□□ -0.71
SH3D19-209ENST00000514013 MPHOSPH6Q99547 160 aaKnown RBP10.63□□□□□ -0.71
SH3D19-209ENST00000514013 C11orf84Q9BUA3 381 aaPredicted RBP10.63□□□□□ -0.71
SH3D19-209ENST00000514013 KATNAL1Q9BW62 490 aa10.63□□□□□ -0.71
SH3D19-209ENST00000514013 LMAN2LQ9H0V9 348 aa10.63□□□□□ -0.71
SH3D19-209ENST00000514013 BCAS3Q9H6U6 928 aa10.63□□□□□ -0.71
SH3D19-209ENST00000514013 BARX2Q9UMQ3 279 aaPredicted RBP10.63□□□□□ -0.71
SH3D19-209ENST00000514013 USP15Q9Y4E8 981 aaPredicted RBP10.63□□□□□ -0.71
SH3D19-209ENST00000514013 ADGRA3Q8IWK6 1321 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 RB1P06400 928 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 ZFYP08048 801 aaPredicted RBP10.62□□□□□ -0.71
SH3D19-209ENST00000514013 SLC3A2P08195 630 aaKnown RBP10.62□□□□□ -0.71
SH3D19-209ENST00000514013 GOLGA8HP0CJ92 632 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 TOP1P11387 765 aaKnown RBP10.62□□□□□ -0.71
SH3D19-209ENST00000514013 EIF2AK2P19525 551 aaKnown RBP10.62□□□□□ -0.71
SH3D19-209ENST00000514013 NDUFV1P49821 464 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 ZMYM1Q5SVZ6 1142 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 VPS53Q5VIR6 699 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 GPKOWQ92917 476 aaPredicted RBP eCLIP10.62□□□□□ -0.71
SH3D19-209ENST00000514013 CLP1Q92989 425 aaKnown RBP10.62□□□□□ -0.71
SH3D19-209ENST00000514013 RPGRIP1Q96KN7 1286 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 NACAP1Q9BZK3 213 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 TMEM134Q9H6X4 195 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 PLAGL2Q9UPG8 496 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 SUPT16HQ9Y5B9 1047 aaKnown RBP10.62□□□□□ -0.71
SH3D19-209ENST00000514013 MRVI1Q9Y6F6 885 aa10.62□□□□□ -0.71
SH3D19-209ENST00000514013 TPRP12270 2363 aaKnown RBP10.62□□□□□ -0.71
SH3D19-209ENST00000514013 NLRC5Q86WI3 1866 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 DMXL1Q9Y485 3027 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 ORC4O43929 436 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 FGRP09769 529 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 SMIM10L2AP0DMW4 78 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 SMIM10L2BP0DMW5 78 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 ARP10275 920 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 SP2Q02086 613 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 COASYQ13057 564 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 LAMC2Q13753 1193 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 STXBP2Q15833 593 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 MYSM1Q5VVJ2 828 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 EFHBQ8N7U6 833 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 RGS22Q8NE09 1264 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 VN1R2Q8NFZ6 395 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 NSUN6Q8TEA1 469 aaKnown RBP10.61□□□□□ -0.71
SH3D19-209ENST00000514013 ATP6V0A1Q93050 837 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 RMDN3Q96TC7 470 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 UBA5Q9GZZ9 404 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 TELO2Q9Y4R8 837 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 DNAH14Q0VDD8 3507 aa10.61□□□□□ -0.71
SH3D19-209ENST00000514013 RALGAPA2Q2PPJ7 1873 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 C17orf102A2RUQ5 167 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 B4DLN1 442 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 OPLAHO14841 1288 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 ST8SIA5O15466 376 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 PPFIA4O75335 1185 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 ADH1BP00325 375 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 ITGB1P05556 798 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 NR3C2P08235 984 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 CFHP08603 1231 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 ICAM3P32942 547 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 NBL1P41271 181 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 MRPL12P52815 198 aaKnown RBP10.6□□□□□ -0.71
SH3D19-209ENST00000514013 PTPN21Q16825 1174 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 TREML4Q6UXN2 200 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 ERMP1Q7Z2K6 904 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 RBM23Q86U06 439 aaKnown RBP10.6□□□□□ -0.71
SH3D19-209ENST00000514013 TMEM105Q8N8V8 129 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 IL31RAQ8NI17 732 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 SPPL3Q8TCT6 385 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 LINC01599Q8WXQ3 324 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 SUSD6Q92537 303 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 ZNF689Q96CS4 500 aaPredicted RBP10.6□□□□□ -0.71
SH3D19-209ENST00000514013 SPATA33Q96N06 139 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 PHF7Q9BWX1 381 aaPredicted RBP10.6□□□□□ -0.71
SH3D19-209ENST00000514013 RNPEPQ9H4A4 650 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 ANAPC4Q9UJX5 808 aa10.6□□□□□ -0.71
SH3D19-209ENST00000514013 MRPL42Q9Y6G3 142 aaKnown RBP10.6□□□□□ -0.71
SH3D19-209ENST00000514013 KMT2BQ9UMN6 2715 aaPredicted RBP10.6□□□□□ -0.71
SH3D19-209ENST00000514013 CEP250Q9BV73 2442 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 CACNA1GO43497 2377 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 MED19A0JLT2 244 aaPredicted RBP10.59□□□□□ -0.71
SH3D19-209ENST00000514013 KDM4AO75164 1064 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 EIF3JO75822 258 aaKnown RBP10.59□□□□□ -0.71
SH3D19-209ENST00000514013 GGPS1O95749 300 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 CHRNA1P02708 482 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 GHRP10912 638 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 UBA1P22314 1058 aaKnown RBP10.59□□□□□ -0.71
SH3D19-209ENST00000514013 NRIP1P48552 1158 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 BTG3Q14201 252 aaPredicted RBP10.59□□□□□ -0.71
SH3D19-209ENST00000514013 CDC37Q16543 378 aaPredicted RBP10.59□□□□□ -0.71
SH3D19-209ENST00000514013 RRP12Q5JTH9 1297 aaKnown RBP10.59□□□□□ -0.71
SH3D19-209ENST00000514013 CELF3Q5SZQ8 465 aaKnown RBP10.59□□□□□ -0.71
SH3D19-209ENST00000514013 TRIM50Q86XT4 487 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 OTUD7AQ8TE49 926 aaPredicted RBP10.59□□□□□ -0.71
SH3D19-209ENST00000514013 IWS1Q96ST2 819 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 SMOC2Q9H3U7 446 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 PXMP2Q9NR77 195 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
SH3D19-209ENST00000514013 SETD4Q9NVD3 440 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms