RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CISD2Q8N5K1 135 aaKnown RBP4.65□□□□□ -1.67
CHD1-207ENST00000511628 STPG3Q8N7X2 389 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 JMYQ8N9B5 988 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 DTX3Q8N9I9 347 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 PCDH19Q8TAB3 1148 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 THAP3Q8WTV1 239 aaPredicted RBP4.65□□□□□ -1.67
CHD1-207ENST00000511628 GPR20Q99678 358 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 FANCLQ9NW38 375 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.65□□□□□ -1.67
CHD1-207ENST00000511628 SRPK3Q9UPE1 567 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 PTCH2Q9Y6C5 1203 aa4.65□□□□□ -1.67
CHD1-207ENST00000511628 CCDC163A0A0D9SF12 145 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 NPEPPSL1A6NEC2 478 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 H0Y858 1186 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 KCNK3O14649 394 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 LAMTOR5O43504 91 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 B4GALT4O60513 344 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 PLATP00750 562 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 PTPN1P18031 435 aaKnown RBP4.64□□□□□ -1.67
CHD1-207ENST00000511628 NFATC3Q12968 1075 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 FIGNQ5HY92 759 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 RALYLQ86SE5 291 aaKnown RBP4.64□□□□□ -1.67
CHD1-207ENST00000511628 KLHL36Q8N4N3 616 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 IGDCC4Q8TDY8 1250 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 ZCCHC14Q8WYQ9 949 aaKnown RBP4.64□□□□□ -1.67
CHD1-207ENST00000511628 YTHDC1Q96MU7 727 aaKnown RBP4.64□□□□□ -1.67
CHD1-207ENST00000511628 TACO1Q9BSH4 297 aaKnown RBP4.64□□□□□ -1.67
CHD1-207ENST00000511628 SLC52A2Q9HAB3 445 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 SLC39A2Q9NP94 309 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 TMEM260Q9NX78 707 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 SMPD4Q9NXE4 827 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 HSPBP1Q9NZL4 362 aa4.64□□□□□ -1.67
CHD1-207ENST00000511628 ZNF839A8K0R7 811 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 ARVCFO00192 962 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 HIP1RO75146 1068 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 CHGBP05060 677 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 C6orf222P0C671 652 aaPredicted RBP4.63□□□□□ -1.67
CHD1-207ENST00000511628 EPHA5P54756 1037 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 JAM2P57087 298 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 TKFCQ3LXA3 575 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 WDR72Q3MJ13 1102 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 HABP4Q5JVS0 413 aaKnown RBP4.63□□□□□ -1.67
CHD1-207ENST00000511628 CNOT11Q9UKZ1 510 aaKnown RBP4.63□□□□□ -1.67
CHD1-207ENST00000511628 CBLCQ9ULV8 474 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 TELO2Q9Y4R8 837 aa4.63□□□□□ -1.67
CHD1-207ENST00000511628 ACOT7O00154 380 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 MAN2B1O00754 1011 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 SCDO00767 359 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 RASGRP1O95267 797 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 ITGB3P05106 788 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 ADRB1P08588 477 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 HSD3B2P26439 372 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 PPP2CBP62714 309 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 PPP2CAP67775 309 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 DBPQ10586 325 aaPredicted RBP4.62□□□□□ -1.67
CHD1-207ENST00000511628 TBC1D10BQ4KMP7 808 aaPredicted RBP4.62□□□□□ -1.67
CHD1-207ENST00000511628 PLEKHG4Q58EX7 1191 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 DBX2Q6ZNG2 339 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 PROSER1Q86XN7 944 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 C2orf69Q8N8R5 385 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 HIPK4Q8NE63 616 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 NUDT10Q8NFP7 164 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 SH3RF2Q8TEC5 729 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 KISS1RQ969F8 398 aaPredicted RBP4.62□□□□□ -1.67
CHD1-207ENST00000511628 NUDT11Q96G61 164 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 MRPL4Q9BYD3 311 aaKnown RBP4.62□□□□□ -1.67
CHD1-207ENST00000511628 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 WASF3Q9UPY6 502 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 COQ6Q9Y2Z9 468 aa4.62□□□□□ -1.67
CHD1-207ENST00000511628 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.61□□□□□ -1.67
CHD1-207ENST00000511628 TCRBV5S4A2TA0A5A2 114 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 ANKRD62A6NC57 917 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 FAM90A27PA6NNH2 459 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 WNT9AO14904 365 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 B4GALT3O60512 393 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 CDC45O75419 566 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 PTGS1P23219 599 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 Q6ZUG5 572 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 LIMS2Q7Z4I7 341 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 BRAPQ7Z569 592 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 DDX53Q86TM3 631 aaKnown RBP4.61□□□□□ -1.67
CHD1-207ENST00000511628 CIR1Q86X95 450 aaPredicted RBP4.61□□□□□ -1.67
CHD1-207ENST00000511628 APPBP2Q92624 585 aa4.61□□□□□ -1.67
CHD1-207ENST00000511628 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.6□□□□□ -1.67
CHD1-207ENST00000511628 SLC12A8A0AV02 714 aa4.6□□□□□ -1.67
CHD1-207ENST00000511628 PPP1R12AO14974 1030 aaPredicted RBP4.6□□□□□ -1.67
CHD1-207ENST00000511628 CLASP2O75122 1294 aaKnown RBP4.6□□□□□ -1.67
CHD1-207ENST00000511628 KRT37O76014 449 aa4.6□□□□□ -1.67
CHD1-207ENST00000511628 ASMTLO95671 621 aa4.6□□□□□ -1.67
CHD1-207ENST00000511628 KNG1P01042 644 aa4.6□□□□□ -1.67
CHD1-207ENST00000511628 AMY2AP04746 511 aa4.6□□□□□ -1.67
CHD1-207ENST00000511628 AMY2BP19961 511 aa4.6□□□□□ -1.67
CHD1-207ENST00000511628 CANXP27824 592 aaKnown RBP4.6□□□□□ -1.67
CHD1-207ENST00000511628 MAGEA10P43363 369 aaPredicted RBP4.6□□□□□ -1.67
CHD1-207ENST00000511628 USP10Q14694 798 aaKnown RBP4.6□□□□□ -1.67
CHD1-207ENST00000511628 TMEM132BQ14DG7 1078 aa4.6□□□□□ -1.67
CHD1-207ENST00000511628 CPZQ66K79 652 aa4.6□□□□□ -1.67
CHD1-207ENST00000511628 PKN3Q6P5Z2 889 aa4.6□□□□□ -1.67
CHD1-207ENST00000511628 HHIPL2Q6UWX4 724 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms