RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 PRMT2P55345 433 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 UBXN1Q04323 297 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 ORC2Q13416 577 aaPredicted RBP14.24□□□□□ -0.13
HMGB2-205ENST00000511316 MEA1Q16626 185 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 TTBK2Q6IQ55 1244 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 GPR142Q7Z601 462 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 CCDC155Q8N6L0 562 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 MB21D1Q8N884 522 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 PRPF38AQ8NAV1 312 aaKnown RBP14.24□□□□□ -0.13
HMGB2-205ENST00000511316 OXER1Q8TDS5 423 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 PNKPQ96T60 521 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 RRP15Q9Y3B9 282 aaKnown RBP14.24□□□□□ -0.13
HMGB2-205ENST00000511316 RIPK3Q9Y572 518 aa14.24□□□□□ -0.13
HMGB2-205ENST00000511316 ZNF536O15090 1300 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 A0A1W2PQJ5 194 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
HMGB2-205ENST00000511316 ATP2A1O14983 1001 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 RAD21O60216 631 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 SCG2P13521 617 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 PRLRP16471 622 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 STX17P56962 302 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 PTGDRQ13258 359 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 IRF5Q13568 498 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 ARHGEF6Q15052 776 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 BTNL9Q6UXG8 535 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 KCTD1Q719H9 257 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 AFAP1L1Q8TED9 768 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 PPM1EQ8WY54 764 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 SLF1Q9BQI6 1058 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 CRACR2AQ9BSW2 395 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 SLC38A10Q9HBR0 1119 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 VPS54Q9P1Q0 977 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 FEM1BQ9UK73 627 aa14.23□□□□□ -0.13
HMGB2-205ENST00000511316 EIF3CLB5ME19 914 aaKnown RBP14.22□□□□□ -0.13
HMGB2-205ENST00000511316 PPFIA4O75335 1185 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 ERCC3P19447 782 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 ATP2B1P20020 1258 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 MAPK4P31152 587 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 PRPHP41219 470 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 STAT6P42226 847 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 SLC1A4P43007 532 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 MAGEA9P43362 315 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 VSNL1P62760 191 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 TROAPQ12815 778 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 COBLL1Q53SF7 1204 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 USP49Q70CQ1 688 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 ADSSL1Q8N142 457 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 SH3TC2Q8TF17 1288 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 ZNF333Q96JL9 665 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 AK8Q96MA6 479 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 EIF3CQ99613 913 aaKnown RBP14.22□□□□□ -0.13
HMGB2-205ENST00000511316 ABCB11O95342 1321 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 A0A087X0B3 334 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 USO1O60763 962 aaKnown RBP14.22□□□□□ -0.13
HMGB2-205ENST00000511316 FGFR1OPO95684 399 aaKnown RBP14.22□□□□□ -0.13
HMGB2-205ENST00000511316 HOXD10P28358 340 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 CCT6AP40227 531 aaKnown RBP14.22□□□□□ -0.13
HMGB2-205ENST00000511316 NLRP5P59047 1200 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 ZBED6P86452 979 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 PFKFB3Q16875 520 aaPredicted RBP14.22□□□□□ -0.13
HMGB2-205ENST00000511316 KIAA1328Q86T90 577 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 PXYLP1Q8TE99 480 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 COG1Q8WTW3 980 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 IRX2Q9BZI1 471 aaPredicted RBP14.22□□□□□ -0.13
HMGB2-205ENST00000511316 EPC1Q9H2F5 836 aa14.22□□□□□ -0.13
HMGB2-205ENST00000511316 V9GY48 417 aaPredicted RBP14.22□□□□□ -0.13
HMGB2-205ENST00000511316 A0A0U1RQG5 324 aaPredicted RBP14.21□□□□□ -0.13
HMGB2-205ENST00000511316 TNRC18O15417 2968 aaPredicted RBP14.21□□□□□ -0.13
HMGB2-205ENST00000511316 RHOBTB3O94955 611 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 PARP1P09874 1014 aaKnown RBP14.21□□□□□ -0.13
HMGB2-205ENST00000511316 RHOXF2BP0C7M4 288 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 AMPD3Q01432 767 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 ZNF543Q08ER8 600 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 CCDC122Q5T0U0 273 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 ZNF572Q7Z3I7 529 aaPredicted RBP14.21□□□□□ -0.13
HMGB2-205ENST00000511316 PLEKHH3Q7Z736 793 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 ACRBPQ8NEB7 543 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 SHCBP1Q8NEM2 672 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 TRIM58Q8NG06 486 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 DCAF4Q8WV16 495 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 RHOXF2Q9BQY4 288 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 CCSER1Q9C0I3 900 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 ZSWIM4Q9H7M6 989 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 FAN1Q9Y2M0 1017 aa14.21□□□□□ -0.13
HMGB2-205ENST00000511316 COL11A1P12107 1806 aaPredicted RBP14.21□□□□□ -0.13
HMGB2-205ENST00000511316 KIAA0100Q14667 2235 aaKnown RBP14.21□□□□□ -0.13
HMGB2-205ENST00000511316 CNTNAP5Q8WYK1 1306 aa14.21□□□□□ -0.14
HMGB2-205ENST00000511316 XRCC5P13010 732 aaKnown RBP14.2□□□□□ -0.14
HMGB2-205ENST00000511316 SLC16A2P36021 539 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 STAT3P40763 770 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 GRB14Q14449 540 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 ZNF174Q15697 407 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 FOXR2Q6PJQ5 311 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 RIOX2Q8IUF8 465 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 EFCAB13Q8IY85 973 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 DAGLBQ8NCG7 672 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 COA7Q96BR5 231 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 VPS16Q9H269 839 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 DISC1Q9NRI5 854 aa14.2□□□□□ -0.14
HMGB2-205ENST00000511316 EXOC1Q9NV70 894 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms