RNA–Protein interactions for RNA: ENST00000509870.1

HOXC-AS3-201, HOXC cluster antisense RNA 3, humanhuman

TSL 4 BASIC

Gene HOXC-AS3, Length 544 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC-AS3-201ENST00000509870 CPLX1O14810 134 aa17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 CTSHP09668 335 aa17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 FAM86B2P0C5J1 330 aa17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 INSRRP14616 1297 aa17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 POU3F3P20264 500 aaPredicted RBP17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 CPLX2Q6PUV4 134 aaKnown RBP17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 TBC1D22BQ9NU19 505 aa17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 INSL6Q9Y581 213 aa17.22■□□□□ 0.35
HOXC-AS3-201ENST00000509870 IGLV3-22A0A075B6J6 115 aa17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 IPO5O00410 1097 aaKnown RBP17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 GTPBP6O43824 516 aaPredicted RBP17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 EIF5BO60841 1220 aaKnown RBP17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 SSRP1Q08945 709 aaKnown RBP17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 MARCH8Q5T0T0 291 aa17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 FAM177A1Q8N128 213 aaPredicted RBP17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 PPM1EQ8WY54 764 aa17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 TRPC6Q9Y210 931 aa17.21■□□□□ 0.35
HOXC-AS3-201ENST00000509870 DOCK5Q9H7D0 1870 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 IGKV6D-21A0A0A0MT36 114 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 DHX15O43143 795 aaKnown RBP17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 CHRNA1P02708 482 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 CIITAP33076 1130 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 PLCB4Q15147 1175 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 FAM160B1Q5W0V3 765 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ABHD15Q6UXT9 468 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 RUFY4Q6ZNE9 571 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 TMCO2Q7Z6W1 182 aaPredicted RBP17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ARNTL2Q8WYA1 636 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ZNF577Q9BSK1 485 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 C22orf23Q9BZE7 217 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 CERS4Q9HA82 394 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 GBF1Q92538 1859 aa17.2■□□□□ 0.34
HOXC-AS3-201ENST00000509870 POTEB3A0JP26 581 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 BACH1O14867 736 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 DEXIO95424 95 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 CCNE2O96020 404 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 USP11P51784 963 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 NLRP5P59047 1200 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ANAPC15P60006 121 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 IGBP1P78318 339 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 CCDC85BQ15834 202 aaPredicted RBP17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 IER5Q5VY09 327 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 MIS18BP1Q6P0N0 1132 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 POTEBQ6S5H4 581 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 MYOCDQ8IZQ8 938 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 DNAJB3Q8WWF6 145 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ATXN2LQ8WWM7 1075 aaKnown RBP17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 SYMPKQ92797 1274 aaKnown RBP17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 TOP1MTQ969P6 601 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 COL25A1Q9BXS0 654 aaPredicted RBP17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 VPS54Q9P1Q0 977 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 TCEAL9Q9UHQ7 104 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 PCDHA2Q9Y5H9 948 aa17.19■□□□□ 0.34
HOXC-AS3-201ENST00000509870 LCHNA4D1U4 455 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ADAMTS3O15072 1205 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 HBP1O60381 514 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ARHGEF15O94989 841 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ERVK-21P61565 698 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 HTRA4P83105 476 aaPredicted RBP17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 MGAT3Q09327 533 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 PRR16Q569H4 304 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 GALNT17Q6IS24 598 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ZNF746Q6NUN9 644 aaPredicted RBP17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 FAM117BQ6P1L5 589 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 SMAP1Q8IYB5 467 aaPredicted RBP17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 NME8Q8N427 588 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 TGS1Q96RS0 853 aaKnown RBP17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 MTCH2Q9Y6C9 303 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 SQORQ9Y6N5 450 aa17.18■□□□□ 0.34
HOXC-AS3-201ENST00000509870 CDH23Q9H251 3354 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 CUL9Q8IWT3 2517 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 LINC01553A4QN01 128 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 M0QZ92 97 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 DDX39AO00148 427 aaKnown RBP17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 RFXAPO00287 272 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 CDKL5O76039 1030 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 GHRP10912 638 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 MRPS6P82932 125 aaKnown RBP17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 KRT76Q01546 638 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 SWSAP1Q6NVH7 229 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 PDXDC2PQ6P474 469 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 FAM43BQ6ZT52 329 aaPredicted RBP17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 RASGRP4Q8TDF6 673 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ATP8B4Q8TF62 1192 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 KAT6AQ92794 2004 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 OSBPL7Q9BZF2 842 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 ZNF302Q9NR11 478 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 LMCD1Q9NZU5 365 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 THEGQ9P2T0 379 aa17.17■□□□□ 0.34
HOXC-AS3-201ENST00000509870 PCDHA4Q9UN74 947 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms