RNA–Protein interactions for RNA: ENST00000509148.1

RACK1-221, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-221	ENST00000509148	PRPF3	O43395	683 aa	Known RBP	11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	CPA1	P15085	419 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	SLC26A2	P50443	739 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	ACTR2	P61160	394 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	FAM117B	Q6P1L5	589 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	PLPPR4	Q7Z2D5	763 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	CYP2W1	Q8TAV3	490 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	BICD2	Q8TD16	824 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	PGBD1	Q96JS3	809 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	IFIH1	Q9BYX4	1025 aa	Known RBP	11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	ZMYND12	Q9H0C1	365 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	AGO4	Q9HCK5	861 aa	Known RBP	11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	PRDM6	Q9NQX0	595 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	LMCD1	Q9NZU5	365 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	TRPC6	Q9Y210	931 aa		11.37	□□□□□ -0.59
RACK1-221	ENST00000509148	TRIP12	Q14669	1992 aa	Predicted RBP	11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	LINC01553	A4QN01	128 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	EPOP	A6NHQ4	379 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	ARHGEF15	O94989	841 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	AR	P10275	920 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	STAT5B	P51692	787 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	ERVK-21	P61565	698 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	GRB10	Q13322	594 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	MKRN4P	Q13434	485 aa	Predicted RBP	11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	IER5	Q5VY09	327 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	JAKMIP3	Q5VZ66	844 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	REXO1	Q8N1G1	1221 aa	Known RBP	11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	CCDC148	Q8NFR7	591 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	TOP1MT	Q969P6	601 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	SAMD11	Q96NU1	681 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	YME1L1	Q96TA2	773 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	AGXT2	Q9BYV1	514 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	TMEM260	Q9NX78	707 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	TCEAL9	Q9UHQ7	104 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	COG5	Q9UP83	839 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	NID2	Q14112	1375 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148	TET1	Q8NFU7	2136 aa		11.36	□□□□□ -0.59
RACK1-221	ENST00000509148		M0QZ92	97 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	BACH1	O14867	736 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	ATG7	O95352	703 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	CHRNA1	P02708	482 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	CYP3A4	P08684	503 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	GHR	P10912	638 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	INSRR	P14616	1297 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	IGBP1	P78318	339 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	HTRA4	P83105	476 aa	Predicted RBP	11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	SET	Q01105	290 aa	Predicted RBP	11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	ITGB3BP	Q13352	177 aa	Predicted RBP	11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	FAM160B1	Q5W0V3	765 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	RUFY4	Q6ZNE9	571 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	PLA2G4D	Q86XP0	818 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	DNAJB3	Q8WWF6	145 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	PCYT2	Q99447	389 aa		11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	RNF26	Q9BY78	433 aa	Predicted RBP	11.35	□□□□□ -0.59
RACK1-221	ENST00000509148	GBF1	Q92538	1859 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	POTEB3	A0JP26	581 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	IPO5	O00410	1097 aa	Known RBP	11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	LPXN	O60711	386 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	UPP2	O95045	317 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	IFNAR1	P17181	557 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	PDIA3	P30101	505 aa	Known RBP	11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	EVC	P57679	992 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	MGAT3	Q09327	533 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	PLCB4	Q15147	1175 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	PKN1	Q16512	942 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	MARCH8	Q5T0T0	291 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	MIS18BP1	Q6P0N0	1132 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	CPLX2	Q6PUV4	134 aa	Known RBP	11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	POTEB	Q6S5H4	581 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	TSHZ1	Q6ZSZ6	1077 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	RUFY3	Q7L099	469 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	TRIM22	Q8IYM9	498 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	NME8	Q8N427	588 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	FBXO22	Q8NEZ5	403 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	SP7	Q8TDD2	431 aa	Predicted RBP	11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	GDPD5	Q8WTR4	605 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	PHKB	Q93100	1093 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	ZNF577	Q9BSK1	485 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	SLC26A6	Q9BXS9	759 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	SUGCT	Q9HAC7	445 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	ZSWIM6	Q9HCJ5	1215 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	TBC1D22B	Q9NU19	505 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	MTUS1	Q9ULD2	1270 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	PCDHA2	Q9Y5H9	948 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	CYP46A1	Q9Y6A2	500 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	CDY2A	Q9Y6F7	541 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	SQOR	Q9Y6N5	450 aa		11.34	□□□□□ -0.59
RACK1-221	ENST00000509148	MYO9B	Q13459	2157 aa		11.33	□□□□□ -0.6
RACK1-221	ENST00000509148	IGKV6D-21	A0A0A0MT36	114 aa		11.33	□□□□□ -0.6
RACK1-221	ENST00000509148	SMIM35	A0A1B0GVV1	85 aa		11.33	□□□□□ -0.6
RACK1-221	ENST00000509148	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.33	□□□□□ -0.6
RACK1-221	ENST00000509148	FAM86B1	E9PN63	330 aa		11.33	□□□□□ -0.6
RACK1-221	ENST00000509148	DDX39A	O00148	427 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-221	ENST00000509148	TNFRSF10A	O00220	468 aa		11.33	□□□□□ -0.6
RACK1-221	ENST00000509148	CPLX1	O14810	134 aa		11.33	□□□□□ -0.6
RACK1-221	ENST00000509148	HBP1	O60381	514 aa		11.33	□□□□□ -0.6
RACK1-221	ENST00000509148	FAM86B2	P0C5J1	330 aa		11.33	□□□□□ -0.6

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