RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 COL9A3Q14050 684 aaPredicted RBP9.28□□□□□ -0.92
PUDP-205ENST00000498474 CDC37Q16543 378 aaPredicted RBP9.28□□□□□ -0.92
PUDP-205ENST00000498474 FSCN1Q16658 493 aaKnown RBP9.28□□□□□ -0.92
PUDP-205ENST00000498474 RNF207Q6ZRF8 634 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 ANKRD33Q7Z3H0 272 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 IQCA1Q86XH1 822 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 DGKHQ86XP1 1220 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 ADGRF4Q8IZF3 695 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 PCSK9Q8NBP7 692 aaKnown RBP9.28□□□□□ -0.92
PUDP-205ENST00000498474 AP5M1Q9H0R1 490 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 KAT14Q9H8E8 782 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 NDFIP2Q9NV92 336 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 COL20A1Q9P218 1284 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 TRIP12Q14669 1992 aaPredicted RBP9.28□□□□□ -0.92
PUDP-205ENST00000498474 UMODL1Q5DID0 1318 aa9.28□□□□□ -0.92
PUDP-205ENST00000498474 CHD7Q9P2D1 2997 aa9.27□□□□□ -0.92
PUDP-205ENST00000498474 KIAA1217Q5T5P2 1943 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 DHX16O60231 1041 aaKnown RBP9.27□□□□□ -0.93
PUDP-205ENST00000498474 ARIH2O95376 493 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 TIMP1P01033 207 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 CYP21A2P08686 494 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 PCP11498 1178 aaKnown RBP9.27□□□□□ -0.93
PUDP-205ENST00000498474 FOXK2Q01167 660 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 LBRQ14739 615 aaKnown RBP9.27□□□□□ -0.93
PUDP-205ENST00000498474 QRICH1Q2TAL8 776 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 IQSEC1Q6DN90 963 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 FAM109BQ6ICB4 259 aaPredicted RBP9.27□□□□□ -0.93
PUDP-205ENST00000498474 STOX1Q6ZVD7 989 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 C16orf59Q7L2K0 433 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 FAM126BQ8IXS8 530 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 MORC4Q8TE76 937 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 ANKS1AQ92625 1134 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 GUCD1Q96NT3 240 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 TAAR1Q96RJ0 339 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 WDR11Q9BZH6 1224 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 TRPV6Q9H1D0 765 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 JMJD4Q9H9V9 463 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 VTA1Q9NP79 307 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 TBX21Q9UL17 535 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 GBF1Q92538 1859 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 ELP1O95163 1332 aa9.27□□□□□ -0.93
PUDP-205ENST00000498474 GRXCR1A8MXD5 290 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 MYL3P08590 195 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 PARP1P09874 1014 aaKnown RBP9.26□□□□□ -0.93
PUDP-205ENST00000498474 CSF2RAP15509 400 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 CHMP4BP1P59074 171 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 FPGSQ05932 587 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 SEMA3FQ13275 785 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 ITGA7Q13683 1181 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 MCM6Q14566 821 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 SEC23AQ15436 765 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 SLC35G1Q2M3R5 365 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 GPATCH4Q5T3I0 446 aaKnown RBP9.26□□□□□ -0.93
PUDP-205ENST00000498474 IFIT1BQ5T764 474 aaKnown RBP9.26□□□□□ -0.93
PUDP-205ENST00000498474 SLC17A8Q8NDX2 589 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 OR6J1Q8NGC5 347 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 PIBF1Q8WXW3 757 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 RNPC3Q96LT9 517 aaKnown RBP9.26□□□□□ -0.93
PUDP-205ENST00000498474 TOX2Q96NM4 488 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.26□□□□□ -0.93
PUDP-205ENST00000498474 UBAC1Q9BSL1 405 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 KRT23Q9C075 422 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 TTYH1Q9H313 450 aaPredicted RBP9.26□□□□□ -0.93
PUDP-205ENST00000498474 CRISPLD1Q9H336 500 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 ADD3Q9UEY8 706 aaKnown RBP9.26□□□□□ -0.93
PUDP-205ENST00000498474 CTNNA3Q9UI47 895 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 MAD2L2Q9UI95 211 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 HCN2Q9UL51 889 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 ATXN7L1Q9ULK2 861 aaPredicted RBP9.26□□□□□ -0.93
PUDP-205ENST00000498474 USP3Q9Y6I4 520 aa9.26□□□□□ -0.93
PUDP-205ENST00000498474 DOCK5Q9H7D0 1870 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 TMEM229AB2RXF0 380 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 E7EWF7 191 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 SORBS3O60504 671 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 B4GALT4O60513 344 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 PPP1R11O60927 126 aaPredicted RBP9.25□□□□□ -0.93
PUDP-205ENST00000498474 CD4P01730 458 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 BMP4P12644 408 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 ATP4AP20648 1035 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 FGFR3P22607 806 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 SMTNP53814 917 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 CCL23P55773 120 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 NKX3-2P78367 333 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 LY6KQ17RY6 165 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 DUSP28Q4G0W2 176 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 ASPRV1Q53RT3 343 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 TMEM240Q5SV17 173 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 MFSD5Q6N075 450 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 SEPT14Q6ZU15 432 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 FBXO11Q86XK2 927 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 HOMER1Q86YM7 354 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 SLC43A3Q8NBI5 491 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 SYTL5Q8TDW5 730 aaPredicted RBP9.25□□□□□ -0.93
PUDP-205ENST00000498474 EDARADDQ8WWZ3 215 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 SEMA6BQ9H3T3 888 aa9.25□□□□□ -0.93
PUDP-205ENST00000498474 TRMT13Q9NUP7 481 aaKnown RBP9.25□□□□□ -0.93
PUDP-205ENST00000498474 DNAAF2Q9NVR5 837 aaKnown RBP9.25□□□□□ -0.93
PUDP-205ENST00000498474 WDR19Q8NEZ3 1342 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms