RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 TSEN34Q9BSV6 310 aaKnown RBP13.38□□□□□ -0.27
CUX1-210ENST00000497815 MTG1Q9BT17 334 aaPredicted RBP13.38□□□□□ -0.27
CUX1-210ENST00000497815 SENP6Q9GZR1 1112 aaPredicted RBP13.38□□□□□ -0.27
CUX1-210ENST00000497815 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 ZNF302Q9NR11 478 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 FBXO2Q9UK22 296 aaPredicted RBP13.38□□□□□ -0.27
CUX1-210ENST00000497815 PHF24Q9UPV7 400 aa13.38□□□□□ -0.27
CUX1-210ENST00000497815 A0A1W2PQ45 241 aaPredicted RBP13.37□□□□□ -0.27
CUX1-210ENST00000497815 A0A1W2PQY0 241 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 H3BRB1 525 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 CDC25AP30304 524 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 PSEN2P49810 448 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 STAT5BP51692 787 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 EPHA7Q15375 998 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 UGCGQ16739 394 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 TPRNQ4KMQ1 711 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 PDXDC2PQ6P474 469 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 RDM1Q8NG50 284 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 ERMNQ8TAM6 284 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 KAT2BQ92831 832 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 TNPO1Q92973 898 aaKnown RBP13.37□□□□□ -0.27
CUX1-210ENST00000497815 DYDC2Q96IM9 177 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 SPATA32Q96LK8 384 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 GLT1D1Q96MS3 346 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 CLIC6Q96NY7 704 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 EIF2AK1Q9BQI3 630 aaKnown RBP13.37□□□□□ -0.27
CUX1-210ENST00000497815 RAB34Q9BZG1 259 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 SMARCAD1Q9H4L7 1026 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 TUT1Q9H6E5 874 aaKnown RBP13.37□□□□□ -0.27
CUX1-210ENST00000497815 C11orf49Q9H6J7 331 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 STARD7Q9NQZ5 370 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
CUX1-210ENST00000497815 EMSYQ7Z589 1322 aa13.37□□□□□ -0.27
CUX1-210ENST00000497815 IGKV6D-21A0A0A0MT36 114 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 LGR5O75473 907 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 CABYRO75952 493 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 F2P00734 622 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 ME1P48163 572 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
CUX1-210ENST00000497815 CTTNQ14247 550 aaKnown RBP13.36□□□□□ -0.27
CUX1-210ENST00000497815 PDIA5Q14554 519 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 MFSD10Q14728 455 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 ZRSR1Q15695 479 aaKnown RBP13.36□□□□□ -0.27
CUX1-210ENST00000497815 KIAA0753Q2KHM9 967 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 FAM47CQ5HY64 1035 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 TPH2Q8IWU9 490 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 IGSF22Q8N9C0 903 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
CUX1-210ENST00000497815 KCNG4Q8TDN1 519 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 SNX29Q8TEQ0 813 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 LEO1Q8WVC0 666 aaPredicted RBP13.36□□□□□ -0.27
CUX1-210ENST00000497815 CSRNP2Q9H175 543 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 ERAP1Q9NZ08 941 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 RCOR1Q9UKL0 485 aa13.36□□□□□ -0.27
CUX1-210ENST00000497815 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
CUX1-210ENST00000497815 PPP6R2O75170 966 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 MED24O75448 989 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 LONP1P36776 959 aaKnown RBP13.35□□□□□ -0.27
CUX1-210ENST00000497815 CCT6AP40227 531 aaKnown RBP13.35□□□□□ -0.27
CUX1-210ENST00000497815 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
CUX1-210ENST00000497815 ITGA7Q13683 1181 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 NBPF20Q3BBV1 942 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 KRT79Q5XKE5 535 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 PLPPR4Q7Z2D5 763 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 AFAP1L1Q8TED9 768 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 ATP6V0A1Q93050 837 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 LXNQ9BS40 222 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 KATNAL1Q9BW62 490 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 SCAND2PQ9GZW5 306 aaPredicted RBP13.35□□□□□ -0.27
CUX1-210ENST00000497815 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 IGSF9BQ9UPX0 1349 aa13.35□□□□□ -0.27
CUX1-210ENST00000497815 A0A087WWV3 80 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 POTEB3A0JP26 581 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 TMEM150BA6NC51 233 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 HAS3O00219 553 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 ZNF862O60290 1169 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 SLITRK3O94933 977 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
CUX1-210ENST00000497815 COL6A1P12109 1028 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 CAPN2P17655 700 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 ATP4AP20648 1035 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 UBA7P41226 1012 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 PSMC5P62195 406 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 PRKCEQ02156 737 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 PLCB4Q15147 1175 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 HAUS3Q68CZ6 603 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 POTEBQ6S5H4 581 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 CABP7Q86V35 215 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 CATSPER3Q86XQ3 398 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 C7orf31Q8N865 590 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 RASSF8Q8NHQ8 419 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 AK8Q96MA6 479 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 PLIN2Q99541 437 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 HSD17B14Q9BPX1 270 aa13.34□□□□□ -0.27
CUX1-210ENST00000497815 WRAP73Q9P2S5 460 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms