RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 MYO9BQ13459 2157 aa17.21■□□□□ 0.34
NEK4-206ENST00000496822 TRANK1O15050 2925 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 SIP14410 1827 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 IGLV3-22A0A075B6J6 115 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 DDX39AO00148 427 aaKnown RBP17.2■□□□□ 0.34
NEK4-206ENST00000496822 CHRNA1P02708 482 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 IGBP1P78318 339 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 CCT2P78371 535 aaKnown RBP17.2■□□□□ 0.34
NEK4-206ENST00000496822 MGAT3Q09327 533 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 RUFY3Q7L099 469 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 MYOCDQ8IZQ8 938 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 RASGRP4Q8TDF6 673 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 SEPT8Q92599 483 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 UIMC1Q96RL1 719 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 RAD9AQ99638 391 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 SLC26A6Q9BXS9 759 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 MTCH2Q9Y6C9 303 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 REV3LO60673 3130 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 MICAL3Q7RTP6 2002 aa17.2■□□□□ 0.34
NEK4-206ENST00000496822 MBLAC1A4D2B0 266 aaPredicted RBP17.19■□□□□ 0.34
NEK4-206ENST00000496822 LINC01553A4QN01 128 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 CCNE2O96020 404 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 AMHP03971 560 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 INSRRP14616 1297 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 IFNAR1P17181 557 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 ZNF76P36508 570 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 EVCP57679 992 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 GRB10Q13322 594 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 PLCB4Q15147 1175 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 NIPA1Q7RTP0 329 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 RPAINQ86UA6 219 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 PLA2G4DQ86XP0 818 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 REXO1Q8N1G1 1221 aaKnown RBP17.19■□□□□ 0.34
NEK4-206ENST00000496822 GDPD5Q8WTR4 605 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 TRAPPC12Q8WVT3 735 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 LARP6Q9BRS8 491 aaKnown RBP17.19■□□□□ 0.34
NEK4-206ENST00000496822 RNF26Q9BY78 433 aaPredicted RBP17.19■□□□□ 0.34
NEK4-206ENST00000496822 UPF3BQ9BZI7 483 aaKnown RBP17.19■□□□□ 0.34
NEK4-206ENST00000496822 VPS54Q9P1Q0 977 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 THEGQ9P2T0 379 aa17.19■□□□□ 0.34
NEK4-206ENST00000496822 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.18■□□□□ 0.34
NEK4-206ENST00000496822 EPB41L2O43491 1005 aaKnown RBP17.18■□□□□ 0.34
NEK4-206ENST00000496822 LPXNO60711 386 aa17.18■□□□□ 0.34
NEK4-206ENST00000496822 GHRP10912 638 aa17.18■□□□□ 0.34
NEK4-206ENST00000496822 TAF2Q6P1X5 1199 aa17.18■□□□□ 0.34
NEK4-206ENST00000496822 DNAJB3Q8WWF6 145 aa17.18■□□□□ 0.34
NEK4-206ENST00000496822 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
NEK4-206ENST00000496822 AZI2Q9H6S1 392 aa17.18■□□□□ 0.34
NEK4-206ENST00000496822 C6orf50Q9HD87 102 aa17.18■□□□□ 0.34
NEK4-206ENST00000496822 MTUS1Q9ULD2 1270 aa17.18■□□□□ 0.34
NEK4-206ENST00000496822 TRPC6Q9Y210 931 aa17.18■□□□□ 0.34
NEK4-206ENST00000496822 DHX15O43143 795 aaKnown RBP17.17■□□□□ 0.34
NEK4-206ENST00000496822 ATG7O95352 703 aa17.17■□□□□ 0.34
NEK4-206ENST00000496822 CYP3A4P08684 503 aa17.17■□□□□ 0.34
NEK4-206ENST00000496822 POU3F3P20264 500 aaPredicted RBP17.17■□□□□ 0.34
NEK4-206ENST00000496822 AKAP17AQ02040 695 aaKnown RBP17.17■□□□□ 0.34
NEK4-206ENST00000496822 LPIN1Q14693 890 aa17.17■□□□□ 0.34
NEK4-206ENST00000496822 CCDC12Q8WUD4 166 aaPredicted RBP17.17■□□□□ 0.34
NEK4-206ENST00000496822 FAM49AQ9H0Q0 323 aaPredicted RBP17.17■□□□□ 0.34
NEK4-206ENST00000496822 CDY2AQ9Y6F7 541 aa17.17■□□□□ 0.34
NEK4-206ENST00000496822 IGKV6D-21A0A0A0MT36 114 aa17.16■□□□□ 0.34
NEK4-206ENST00000496822 RRN3P2A6NIE6 340 aa17.16■□□□□ 0.34
NEK4-206ENST00000496822 GTPBP6O43824 516 aaPredicted RBP17.16■□□□□ 0.34
NEK4-206ENST00000496822 STAT5BP51692 787 aa17.16■□□□□ 0.34
NEK4-206ENST00000496822 ERVK-21P61565 698 aa17.16■□□□□ 0.34
NEK4-206ENST00000496822 HTRA4P83105 476 aaPredicted RBP17.16■□□□□ 0.34
NEK4-206ENST00000496822 TJAP1Q5JTD0 557 aa17.16■□□□□ 0.34
NEK4-206ENST00000496822 ABHD15Q6UXT9 468 aa17.16■□□□□ 0.34
NEK4-206ENST00000496822 PLPPR4Q7Z2D5 763 aa17.16■□□□□ 0.34
NEK4-206ENST00000496822 CCDC60Q8IWA6 550 aaPredicted RBP17.16■□□□□ 0.34
NEK4-206ENST00000496822 TGS1Q96RS0 853 aaKnown RBP17.16■□□□□ 0.34
NEK4-206ENST00000496822 CYP46A1Q9Y6A2 500 aa17.16■□□□□ 0.34
NEK4-206ENST00000496822 PRRC2BQ5JSZ5 2229 aaKnown RBP17.15■□□□□ 0.34
NEK4-206ENST00000496822 IPO5O00410 1097 aaKnown RBP17.15■□□□□ 0.34
NEK4-206ENST00000496822 EDIL3O43854 480 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 GNA11P29992 359 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 MRPS6P82932 125 aaKnown RBP17.15■□□□□ 0.34
NEK4-206ENST00000496822 FBXO47Q5MNV8 452 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 RSPH3Q86UC2 560 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 SP7Q8TDD2 431 aaPredicted RBP17.15■□□□□ 0.34
NEK4-206ENST00000496822 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
NEK4-206ENST00000496822 APBB2Q92870 758 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 TOP1MTQ969P6 601 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 LENG9Q96B70 501 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 C17orf80Q9BSJ5 609 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 ZNF577Q9BSK1 485 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 TM6SF1Q9BZW5 370 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 SUGCTQ9HAC7 445 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 INSL6Q9Y581 213 aa17.15■□□□□ 0.34
NEK4-206ENST00000496822 POTEB3A0JP26 581 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 BACH1O14867 736 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 UPP2O95045 317 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 SETQ01105 290 aaPredicted RBP17.14■□□□□ 0.33
NEK4-206ENST00000496822 TMEM62Q0P6H9 643 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 STK3Q13188 491 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 PRR16Q569H4 304 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 MCTP2Q6DN12 878 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 POTEBQ6S5H4 581 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms