RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MBLAC1A4D2B0 266 aaPredicted RBP16.29■□□□□ 0.2
VTI1A-209ENST00000496445 FAM86B1E9PN63 330 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 MEIS1O00470 390 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 PRPF3O43395 683 aaKnown RBP16.29■□□□□ 0.2
VTI1A-209ENST00000496445 FAM86B2P0C5J1 330 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 PSMA5P28066 241 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 EVCP57679 992 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 MGAT3Q09327 533 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 TOB2Q14106 344 aaPredicted RBP16.29■□□□□ 0.2
VTI1A-209ENST00000496445 FAM26DQ5JW98 314 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 KRT40Q6A162 431 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 FAM117BQ6P1L5 589 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 GLG1Q92896 1179 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 ZBTB10Q96DT7 871 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 ZMYND12Q9H0C1 365 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 SMARCAD1Q9H4L7 1026 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 TUBE1Q9UJT0 475 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 MTCH2Q9Y6C9 303 aa16.29■□□□□ 0.2
VTI1A-209ENST00000496445 IGLV3-22A0A075B6J6 115 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.28■□□□□ 0.2
VTI1A-209ENST00000496445 EPB41L2O43491 1005 aaKnown RBP16.28■□□□□ 0.2
VTI1A-209ENST00000496445 LPXNO60711 386 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 CHRNA1P02708 482 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 POU3F3P20264 500 aaPredicted RBP16.28■□□□□ 0.2
VTI1A-209ENST00000496445 PDIA3P30101 505 aaKnown RBP16.28■□□□□ 0.2
VTI1A-209ENST00000496445 ACTR2P61160 394 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 RUFY3Q7L099 469 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 RPAINQ86UA6 219 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 MICALL1Q8N3F8 863 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 RAD9AQ99638 391 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 SDF4Q9BRK5 362 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 ZBED2Q9BTP6 218 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 RNF26Q9BY78 433 aaPredicted RBP16.28■□□□□ 0.2
VTI1A-209ENST00000496445 NCOA5Q9HCD5 579 aaKnown RBP16.28■□□□□ 0.2
VTI1A-209ENST00000496445 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 RALGAPA2Q2PPJ7 1873 aa16.28■□□□□ 0.2
VTI1A-209ENST00000496445 ATG2AQ2TAZ0 1938 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 LINC01553A4QN01 128 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 CCNE2O96020 404 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 CYP3A4P08684 503 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 IFNAR1P17181 557 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 CCT2P78371 535 aaKnown RBP16.27■□□□□ 0.2
VTI1A-209ENST00000496445 GRB10Q13322 594 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 PLCB4Q15147 1175 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 TAF2Q6P1X5 1199 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 NIPA1Q7RTP0 329 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 MYOCDQ8IZQ8 938 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 REXO1Q8N1G1 1221 aaKnown RBP16.27■□□□□ 0.2
VTI1A-209ENST00000496445 RASGRP4Q8TDF6 673 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 GDPD5Q8WTR4 605 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 SEPT8Q92599 483 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 THEGQ9P2T0 379 aa16.27■□□□□ 0.2
VTI1A-209ENST00000496445 BDP1A6H8Y1 2624 aa16.27■□□□□ 0.19
VTI1A-209ENST00000496445 MYH9P35579 1960 aaKnown RBP16.26■□□□□ 0.19
VTI1A-209ENST00000496445 IGKV6D-21A0A0A0MT36 114 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
VTI1A-209ENST00000496445 DHX15O43143 795 aaKnown RBP16.26■□□□□ 0.19
VTI1A-209ENST00000496445 ATG7O95352 703 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 AMHP03971 560 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 NEFLP07196 543 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 INSRRP14616 1297 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 IGBP1P78318 339 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 HTRA4P83105 476 aaPredicted RBP16.26■□□□□ 0.19
VTI1A-209ENST00000496445 TJAP1Q5JTD0 557 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 SP7Q8TDD2 431 aaPredicted RBP16.26■□□□□ 0.19
VTI1A-209ENST00000496445 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
VTI1A-209ENST00000496445 TRAPPC12Q8WVT3 735 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 APBB2Q92870 758 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 SLC26A6Q9BXS9 759 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 IFIH1Q9BYX4 1025 aaKnown RBP16.26■□□□□ 0.19
VTI1A-209ENST00000496445 AZI2Q9H6S1 392 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 C6orf50Q9HD87 102 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 VPS54Q9P1Q0 977 aa16.26■□□□□ 0.19
VTI1A-209ENST00000496445 KIAA1671Q9BY89 1806 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 GHRP10912 638 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 ZNF76P36508 570 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 LPIN1Q14693 890 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 ABHD15Q6UXT9 468 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 CCDC60Q8IWA6 550 aaPredicted RBP16.25■□□□□ 0.19
VTI1A-209ENST00000496445 DNAJB3Q8WWF6 145 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 UIMC1Q96RL1 719 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 MTUS1Q9ULD2 1270 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 TRPC6Q9Y210 931 aa16.25■□□□□ 0.19
VTI1A-209ENST00000496445 GTPBP6O43824 516 aaPredicted RBP16.24■□□□□ 0.19
VTI1A-209ENST00000496445 EDIL3O43854 480 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 GNA11P29992 359 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 STAT5BP51692 787 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 ERVK-21P61565 698 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
VTI1A-209ENST00000496445 FBXO47Q5MNV8 452 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 ATXN2LQ8WWM7 1075 aaKnown RBP16.24■□□□□ 0.19
VTI1A-209ENST00000496445 TOP1MTQ969P6 601 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 LENG9Q96B70 501 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 TGS1Q96RS0 853 aaKnown RBP16.24■□□□□ 0.19
VTI1A-209ENST00000496445 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
VTI1A-209ENST00000496445 UPF3BQ9BZI7 483 aaKnown RBP16.24■□□□□ 0.19
VTI1A-209ENST00000496445 TM6SF1Q9BZW5 370 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 FAM49AQ9H0Q0 323 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms