RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TBX2Q13207 712 aaPredicted RBP7.57□□□□□ -1.2
MSH5-217ENST00000494458 MTMR1Q13613 665 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 ARHGEF16Q5VV41 709 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 SPRYD7Q5W111 196 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 NCAPH2Q6IBW4 605 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 RINT1Q6NUQ1 792 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 NLRX1Q86UT6 975 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 ZSCAN30Q86W11 494 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 SMAP1Q8IYB5 467 aaPredicted RBP7.57□□□□□ -1.2
MSH5-217ENST00000494458 SMYD4Q8IYR2 804 aaPredicted RBP7.57□□□□□ -1.2
MSH5-217ENST00000494458 ABRAQ8N0Z2 381 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 NOC3LQ8WTT2 800 aaKnown RBP7.57□□□□□ -1.2
MSH5-217ENST00000494458 NELFBQ8WX92 580 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 BRI3BPQ8WY22 251 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 FAM212AQ96EL1 285 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 DYDC2Q96IM9 177 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 CDK5RAP3Q96JB5 506 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 NAP1L5Q96NT1 182 aaPredicted RBP7.57□□□□□ -1.2
MSH5-217ENST00000494458 NACC1Q96RE7 527 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 FIZ1Q96SL8 496 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 XPO4Q9C0E2 1151 aaKnown RBP7.57□□□□□ -1.2
MSH5-217ENST00000494458 SEMA6BQ9H3T3 888 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 R3HDMLQ9H3Y0 253 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 MROH8Q9H579 483 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 THAP9Q9H5L6 903 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 PDLIM7Q9NR12 457 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 OLFML3Q9NRN5 406 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 KCND1Q9NSA2 647 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 HOMER2Q9NSB8 354 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 IFNKQ9P0W0 207 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 ZKSCAN5Q9Y2L8 839 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 PASKQ96RG2 1323 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 ESPNB1AK53 854 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 BTBD19C9JJ37 291 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 PSMA7O14818 248 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 CBFA2T2O43439 604 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ZNF500O60304 480 aaPredicted RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 MAPTP10636 758 aaKnown RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 ERCC3P19447 782 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 GCLCP48506 637 aaPredicted RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 ALDH5A1P51649 535 aaPredicted RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 JAK3P52333 1124 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 MARSP56192 900 aaKnown RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 UBASH3AP57075 661 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ERVK-9P63128 1117 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ERVK-24P63145 666 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ASIC1P78348 528 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 IRX3P78415 501 aaPredicted RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 CNTN2Q02246 1040 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 LRRC63Q05C16 580 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 SPAG1Q07617 926 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 FSTL1Q12841 308 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 COASYQ13057 564 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 MAPK7Q13164 816 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 DHX8Q14562 1220 aaKnown RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 STXBP2Q15833 593 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 NFIL3Q16649 462 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ANKRD40Q6AI12 368 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ABHD15Q6UXT9 468 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 GADL1Q6ZQY3 521 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 VSTM4Q8IW00 320 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 C2orf69Q8N8R5 385 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 RASSF8Q8NHQ8 419 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ZNF507Q8TCN5 953 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 P2RX5Q93086 422 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 CCDC47Q96A33 483 aaKnown RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 CTAGE1Q96RT6 745 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 PTPN18Q99952 460 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 TIPINQ9BVW5 301 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 KCTD10Q9H3F6 313 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 KCNF1Q9H3M0 494 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 TMX1Q9H3N1 280 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ZSWIM4Q9H7M6 989 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 RTN4Q9NQC3 1192 aaKnown RBP7.56□□□□□ -1.2
MSH5-217ENST00000494458 ANKEF1Q9NU02 776 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 EXOC1Q9NV70 894 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 PANK4Q9NVE7 773 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 SEL1LQ9UBV2 794 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 PNMA3Q9UL41 463 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ODF2LQ9ULJ1 636 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 TRAF3IP3Q9Y228 551 aa7.56□□□□□ -1.2
MSH5-217ENST00000494458 ADGRA2Q96PE1 1338 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 SYNRGQ9UMZ2 1314 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 RBM47A0AV96 593 aaKnown RBP7.55□□□□□ -1.2
MSH5-217ENST00000494458 BICDL2A1A5D9 508 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 GOLGA6L6A8MZA4 724 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 WDR64B1ANS9 1081 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 STRNO43815 780 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 PEX10O60683 326 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 PPP1R37O75864 691 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 IGHA2P01877 340 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 GAP43P17677 238 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 FECHP22830 423 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 EEF1GP26641 437 aaKnown RBP7.55□□□□□ -1.2
MSH5-217ENST00000494458 HOXD13P35453 343 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 QARSP47897 775 aaKnown RBP7.55□□□□□ -1.2
MSH5-217ENST00000494458 KCNJ6P48051 423 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 SP2Q02086 613 aa7.55□□□□□ -1.2
MSH5-217ENST00000494458 IRF5Q13568 498 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms