RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 PCNX4Q63HM2 1172 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 USP49Q70CQ1 688 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 SV2BQ7L1I2 683 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 CLEC4DQ8WXI8 215 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 AGBL1Q96MI9 1066 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 TRERF1Q96PN7 1200 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 RIT2Q99578 217 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 C7orf25Q9BPX7 421 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 ZHX3Q9H4I2 956 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 BMP2KQ9NSY1 1161 aaPredicted RBP7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 MAN1B1Q9UKM7 699 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 SCAF8Q9UPN6 1271 aaKnown RBP7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 PVALEFA0A1B0GWK0 134 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 BOLA2-SMG1P6H3BVE0 249 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 EDIL3O43854 480 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 SLC25A27O95847 323 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 SKILP12757 684 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 SNAP25P60880 206 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 CEP55Q53EZ4 464 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 EAPPQ56P03 285 aaPredicted RBP7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 PRAMEF18Q5VWM3 479 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 RNF207Q6ZRF8 634 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 CCDC84Q86UT8 332 aaPredicted RBP7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 KIAA1958Q8N8K9 716 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 REPS2Q8NFH8 660 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 ETNPPLQ8TBG4 499 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 HAS1Q92839 578 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 POLR3CQ9BUI4 534 aaPredicted RBP7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 ACAD9Q9H845 621 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 MRGBPQ9NV56 204 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 MKS1Q9NXB0 559 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 PNMA3Q9UL41 463 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 CLEC11AQ9Y240 323 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 PFASO15067 1338 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 PTPRFP10586 1907 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 RLFQ13129 1914 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 MEIS1O00470 390 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 TIMM44O43615 452 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 INMTO95050 263 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 ATG7O95352 703 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 CDC25BP30305 580 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 MYL5Q02045 173 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 KARSQ15046 597 aaKnown RBP7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 TMEM119Q4V9L6 283 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 COBLL1Q53SF7 1204 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 PRR16Q569H4 304 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 ZNF467Q7Z7K2 595 aaPredicted RBP7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 FCHSD1Q86WN1 690 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 PHC3Q8NDX5 983 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 SNX29Q8TEQ0 813 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 ATG4CQ96DT6 458 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 CDHR1Q96JP9 859 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 PCMTD1Q96MG8 357 aaPredicted RBP7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 MXRA8Q9BRK3 442 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 RAVER2Q9HCJ3 691 aaKnown RBP7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 TUFT1Q9NNX1 390 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 RNF146Q9NTX7 359 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 AGTPBP1Q9UPW5 1226 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 A0A0G2JMZ2 1700 aa7.45□□□□□ -1.22
FNDC3B-212ENST00000494000 A0A087X0B3 334 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 CBFA2T2O43439 604 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 PLCG1P19174 1290 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 RPA1P27694 616 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 STAT3P40763 770 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 PPP2R5CQ13362 524 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 SNAPC2Q13487 334 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 ZNF658Q5TYW1 1059 aaPredicted RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 NLRX1Q86UT6 975 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 PLA2G4DQ86XP0 818 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 RIOX2Q8IUF8 465 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 CPXCR1Q8N123 301 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 DNERQ8NFT8 737 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 RDM1Q8NG50 284 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 SYTL5Q8TDW5 730 aaPredicted RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 LARP4BQ92615 738 aaKnown RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 SLC5A5Q92911 643 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 SLC10A4Q96EP9 437 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 UCN2Q96RP3 112 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 IWS1Q96ST2 819 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 PANK2Q9BZ23 570 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 KMT5AQ9NQR1 393 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 TBC1D22BQ9NU19 505 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 GNEQ9Y223 722 aaKnown RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 LOXHD1Q8IVV2 1947 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 IGLV3-22A0A075B6J6 115 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 SPDYE16A6NNV3 312 aaPredicted RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 POTECB2RU33 542 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 RHOBTB3O94955 611 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 RPN1P04843 607 aaKnown RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 RBP3P10745 1247 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 CCND2P30279 289 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 HOXA13P31271 388 aaPredicted RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 CCT6AP40227 531 aaKnown RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 AFMP43652 599 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 DPCR1Q3MIW9 517 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 SNRNP48Q6IEG0 339 aaKnown RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 FOXR2Q6PJQ5 311 aa7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 C11orf57Q6ZUT1 292 aaPredicted RBP7.44□□□□□ -1.22
FNDC3B-212ENST00000494000 C2orf69Q8N8R5 385 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms