RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 LINC01565O15544 149 aa20.34■□□□□ 0.85
NUP50-218ENST00000493456 CSPG5O95196 566 aa20.34■□□□□ 0.85
NUP50-218ENST00000493456 CAMK1Q14012 370 aa20.34■□□□□ 0.85
NUP50-218ENST00000493456 WTAPQ15007 396 aa20.34■□□□□ 0.85
NUP50-218ENST00000493456 EFHBQ8N7U6 833 aa20.34■□□□□ 0.85
NUP50-218ENST00000493456 SEPT1Q8WYJ6 367 aa20.34■□□□□ 0.85
NUP50-218ENST00000493456 GPRASP2Q96D09 838 aa20.34■□□□□ 0.85
NUP50-218ENST00000493456 CDY2AQ9Y6F7 541 aa20.34■□□□□ 0.85
NUP50-218ENST00000493456 SQORQ9Y6N5 450 aa20.34■□□□□ 0.85
NUP50-218ENST00000493456 BAZ2BQ9UIF8 2168 aaKnown RBP20.34■□□□□ 0.85
NUP50-218ENST00000493456 CFAP54Q96N23 3096 aa20.33■□□□□ 0.85
NUP50-218ENST00000493456 PTPN5P54829 565 aa20.33■□□□□ 0.85
NUP50-218ENST00000493456 COASYQ13057 564 aa20.33■□□□□ 0.85
NUP50-218ENST00000493456 CATIPQ7Z7H3 387 aa20.33■□□□□ 0.85
NUP50-218ENST00000493456 NPAS4Q8IUM7 802 aa20.33■□□□□ 0.85
NUP50-218ENST00000493456 SMRP1Q8NCR6 262 aa20.33■□□□□ 0.85
NUP50-218ENST00000493456 DNAJB3Q8WWF6 145 aa20.33■□□□□ 0.85
NUP50-218ENST00000493456 LINC01599Q8WXQ3 324 aa20.33■□□□□ 0.85
NUP50-218ENST00000493456 MRPL42Q9Y6G3 142 aaKnown RBP20.33■□□□□ 0.85
NUP50-218ENST00000493456 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
NUP50-218ENST00000493456 TECTAO75443 2155 aa20.33■□□□□ 0.85
NUP50-218ENST00000493456 MEIS2O14770 477 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 ITGB1P05556 798 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 KCNA2P16389 499 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 MARK3P27448 753 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 MRPS6P82932 125 aaKnown RBP20.32■□□□□ 0.84
NUP50-218ENST00000493456 IER5Q5VY09 327 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 USP17L6PQ6QN14 398 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 TRIM67Q6ZTA4 783 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 RALYLQ86SE5 291 aaKnown RBP20.32■□□□□ 0.84
NUP50-218ENST00000493456 CRIPAKQ8N1N5 446 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 SPPL3Q8TCT6 385 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 GLG1Q92896 1179 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 SPZ1Q9BXG8 430 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 IL25Q9H293 177 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 SMARCAD1Q9H4L7 1026 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 SENP2Q9HC62 589 aa20.32■□□□□ 0.84
NUP50-218ENST00000493456 TMEM221A6NGB7 291 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 LOC730098B7Z3J9 87 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 M0R296 226 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 STAG3L1P0CL83 205 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 CD52P31358 61 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 MARCH8Q5T0T0 291 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 PRSS33Q8NF86 280 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 PIBF1Q8WXW3 757 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 RRP36Q96EU6 259 aaKnown RBP20.31■□□□□ 0.84
NUP50-218ENST00000493456 MAP3K14Q99558 947 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 AGO3Q9H9G7 860 aaKnown RBP20.31■□□□□ 0.84
NUP50-218ENST00000493456 CLEC1BQ9P126 229 aa20.31■□□□□ 0.84
NUP50-218ENST00000493456 SEC63Q9UGP8 760 aaKnown RBP20.31■□□□□ 0.84
NUP50-218ENST00000493456 KIAA1671Q9BY89 1806 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 GSTTP1A0A1W2PQM5 241 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 RRN3P2A6NIE6 340 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 M0QZ92 97 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 ATP9AO75110 1047 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 CYP21A2P08686 494 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 DNAJB1P25685 340 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 CBX2Q14781 532 aaPredicted RBP20.3■□□□□ 0.84
NUP50-218ENST00000493456 ADGRD2Q7Z7M1 963 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 SUGP1Q8IWZ8 645 aaKnown RBP20.3■□□□□ 0.84
NUP50-218ENST00000493456 KLHL23Q8NBE8 558 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 NCOA7Q8NI08 942 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 TNPO1Q92973 898 aaKnown RBP20.3■□□□□ 0.84
NUP50-218ENST00000493456 PBXIP1Q96AQ6 731 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 MYO15AQ9UKN7 3530 aa20.3■□□□□ 0.84
NUP50-218ENST00000493456 FSD2A1L4K1 749 aa20.29■□□□□ 0.84
NUP50-218ENST00000493456 SCG2P13521 617 aa20.29■□□□□ 0.84
NUP50-218ENST00000493456 SMARCA1P28370 1054 aa20.29■□□□□ 0.84
NUP50-218ENST00000493456 KIF5BP33176 963 aa20.29■□□□□ 0.84
NUP50-218ENST00000493456 ZXDAP98168 799 aa20.29■□□□□ 0.84
NUP50-218ENST00000493456 MTMR1Q13613 665 aa20.29■□□□□ 0.84
NUP50-218ENST00000493456 FAM43BQ6ZT52 329 aaPredicted RBP20.29■□□□□ 0.84
NUP50-218ENST00000493456 POF1BQ8WVV4 589 aa20.29■□□□□ 0.84
NUP50-218ENST00000493456 TRPV2Q9Y5S1 764 aa20.29■□□□□ 0.84
NUP50-218ENST00000493456 MAFGO15525 162 aa20.28■□□□□ 0.84
NUP50-218ENST00000493456 ITGB5P18084 799 aa20.28■□□□□ 0.84
NUP50-218ENST00000493456 NRIP1P48552 1158 aa20.28■□□□□ 0.84
NUP50-218ENST00000493456 IGBP1P78318 339 aa20.28■□□□□ 0.84
NUP50-218ENST00000493456 PAK2Q13177 524 aa20.28■□□□□ 0.84
NUP50-218ENST00000493456 CTCFLQ8NI51 663 aaPredicted RBP20.28■□□□□ 0.84
NUP50-218ENST00000493456 LZTS2Q9BRK4 669 aa20.28■□□□□ 0.84
NUP50-218ENST00000493456 FAM49AQ9H0Q0 323 aaPredicted RBP20.28■□□□□ 0.84
NUP50-218ENST00000493456 USP15Q9Y4E8 981 aaPredicted RBP20.28■□□□□ 0.84
NUP50-218ENST00000493456 IGSF9BQ9UPX0 1349 aa20.27■□□□□ 0.84
NUP50-218ENST00000493456 DDAH1O94760 285 aa20.27■□□□□ 0.84
NUP50-218ENST00000493456 INSRRP14616 1297 aa20.27■□□□□ 0.84
NUP50-218ENST00000493456 PAN2Q504Q3 1202 aaKnown RBP20.27■□□□□ 0.84
NUP50-218ENST00000493456 RTN4RL1Q86UN2 441 aaPredicted RBP20.27■□□□□ 0.84
NUP50-218ENST00000493456 RUFY2Q8WXA3 655 aa20.27■□□□□ 0.84
NUP50-218ENST00000493456 PHF7Q9BWX1 381 aaPredicted RBP20.27■□□□□ 0.84
NUP50-218ENST00000493456 AZI2Q9H6S1 392 aa20.27■□□□□ 0.84
NUP50-218ENST00000493456 LRFN2Q9ULH4 789 aa20.27■□□□□ 0.84
NUP50-218ENST00000493456 PADI3Q9ULW8 664 aa20.27■□□□□ 0.84
NUP50-218ENST00000493456 BARX2Q9UMQ3 279 aaPredicted RBP20.27■□□□□ 0.84
NUP50-218ENST00000493456 UBIAD1Q9Y5Z9 338 aa20.27■□□□□ 0.84
NUP50-218ENST00000493456 E7EWF7 191 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 ST18O60284 1047 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 GLP2RO95838 553 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 ATF7P17544 494 aaPredicted RBP20.26■□□□□ 0.83
NUP50-218ENST00000493456 UBE3AQ05086 875 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms