RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 GDF3Q9NR23 364 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 TRAF3IP3Q9Y228 551 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 NRXN2Q9P2S2 1712 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 FAM196BA6NMK8 535 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 RAD21O60216 631 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 SPATA31C1P0DKV0 1188 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 ACTN1P12814 892 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 EPS15P42566 896 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 SLC20A2Q08357 652 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 ENOX2Q16206 610 aaKnown RBP17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 ALS2CLQ60I27 953 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 EPM2AIP1Q7L775 607 aaPredicted RBP17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 RSPH14Q9UHP6 348 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 HDAC9Q9UKV0 1011 aa17.72■□□□□ 0.43
SEMA4D-220ENST00000492386 GRID2IPA4D2P6 1211 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 GOLGA8KD6RF30 607 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 EPB41P11171 864 aaKnown RBP17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 NNTQ13423 1086 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 PRR16Q569H4 304 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 SLFN13Q68D06 897 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 IRF2BP2Q7Z5L9 587 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 FRMD5Q7Z6J6 570 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 IFT20Q8IY31 132 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 LENG9Q96B70 501 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 REEP2Q9BRK0 252 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 PLEKHA4Q9H4M7 779 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 NYAP2Q9P242 653 aa17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 PACSIN2Q9UNF0 486 aaPredicted RBP17.71■□□□□ 0.43
SEMA4D-220ENST00000492386 MEIS1O00470 390 aa17.71■□□□□ 0.42
SEMA4D-220ENST00000492386 SLC9A1P19634 815 aa17.71■□□□□ 0.42
SEMA4D-220ENST00000492386 DNA2P51530 1060 aa17.71■□□□□ 0.42
SEMA4D-220ENST00000492386 PTK2Q05397 1052 aa17.71■□□□□ 0.42
SEMA4D-220ENST00000492386 SFR1Q86XK3 245 aa17.71■□□□□ 0.42
SEMA4D-220ENST00000492386 SIAH1Q8IUQ4 282 aa17.71■□□□□ 0.42
SEMA4D-220ENST00000492386 C10orf67Q8IYJ2 551 aa17.71■□□□□ 0.42
SEMA4D-220ENST00000492386 SYT2Q8N9I0 419 aaPredicted RBP17.71■□□□□ 0.42
SEMA4D-220ENST00000492386 ZSCAN5CA6NGD5 496 aaPredicted RBP17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 BTNL10A8MVZ5 291 aa17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 TBX3O15119 743 aa17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 OPA1O60313 960 aa17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 RPA1P27694 616 aa17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 PABPC4Q13310 644 aaKnown RBP eCLIP17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 KNOP1Q1ED39 458 aaKnown RBP17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 Q4G0T1 1027 aa17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 GJD4Q96KN9 370 aaPredicted RBP17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 ARMCX3Q9UH62 379 aaPredicted RBP17.7■□□□□ 0.42
SEMA4D-220ENST00000492386 HEXIM1O94992 359 aaKnown RBP17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 CRKP46108 304 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 CARSP49589 748 aaKnown RBP17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 IRAK1P51617 712 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 PPFIA1Q13136 1202 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 ZNF571Q7Z3V5 609 aaPredicted RBP17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 ERMNQ8TAM6 284 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 RASSF4Q9H2L5 321 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 FAM86B1E9PN63 330 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 AFPP02771 609 aaKnown RBP17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 FAM86B2P0C5J1 330 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 UCHL3P15374 230 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 CACNB3P54284 484 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 ARL8AQ96BM9 186 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 EPB41L5Q9HCM4 733 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 NFU1Q9UMS0 254 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 DNM3Q9UQ16 869 aa17.69■□□□□ 0.42
SEMA4D-220ENST00000492386 ESYT3A0FGR9 886 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 DDTLA6NHG4 134 aaPredicted RBP17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 PDXKO00764 312 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 HSF2BPO75031 334 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 FAM153BP0C7A2 387 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 MYBP10242 640 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 PON1P27169 355 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 SNAP25P60880 206 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 GUCY2DQ02846 1103 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 FAM153CQ494X1 144 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 CERKLQ49MI3 558 aaPredicted RBP17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 C10orf76Q5T2E6 689 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 ZDHHC15Q96MV8 337 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 FAM153AQ9UHL3 310 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 PCDHAC2Q9Y5I4 1007 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 TCP10Q12799 353 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 ZIM3Q96PE6 472 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 KRT12Q99456 494 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 AMNQ9BXJ7 453 aa17.68■□□□□ 0.42
SEMA4D-220ENST00000492386 AKAP3O75969 853 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 SREBF1P36956 1147 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 PAK2Q13177 524 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 EPHA7Q15375 998 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 BMT2Q1RMZ1 405 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 GBP6Q6ZN66 633 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 USP38Q8NB14 1042 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 RBM46Q8TBY0 533 aaKnown RBP17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 TMEM59LQ9UK28 342 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 BZW2Q9Y6E2 419 aaKnown RBP17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 RSPH10B2B2RC85 870 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 CALUO43852 315 aaPredicted RBP17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 RSPH10BP0C881 870 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 XRCC5P13010 732 aaKnown RBP17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 EXOC3L4Q17RC7 722 aa17.67■□□□□ 0.42
SEMA4D-220ENST00000492386 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms