RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TTLL4Q14679 1199 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 LY6KQ17RY6 165 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 CNNM4Q6P4Q7 775 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 CCDC62Q6P9F0 684 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 C11orf57Q6ZUT1 292 aaPredicted RBP23.31■■□□□ 1.32
SND1-214ENST00000489417 RNF214Q8ND24 703 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 GJD2Q9UKL4 321 aa23.31■■□□□ 1.32
SND1-214ENST00000489417 THSD7BQ9C0I4 1608 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 RBM47A0AV96 593 aaKnown RBP23.3■■□□□ 1.32
SND1-214ENST00000489417 KLRC4O43908 158 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 FARP2O94887 1054 aaPredicted RBP23.3■■□□□ 1.32
SND1-214ENST00000489417 LYPLA2O95372 231 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 TBC1D8O95759 1140 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 CTGFP29279 349 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 PSMC5P62195 406 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 KCNB1Q14721 858 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 TAPT1Q6NXT6 567 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 MIS18BP1Q6P0N0 1132 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 METTL7BQ6UX53 244 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 ABHD15Q6UXT9 468 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 GPBP1Q86WP2 473 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 SYT2Q8N9I0 419 aaPredicted RBP23.3■■□□□ 1.32
SND1-214ENST00000489417 CCDC47Q96A33 483 aaKnown RBP23.3■■□□□ 1.32
SND1-214ENST00000489417 KATNBL1Q9H079 304 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 PDGFCQ9NRA1 345 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 TELO2Q9Y4R8 837 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 MCM3APO60318 1980 aa23.3■■□□□ 1.32
SND1-214ENST00000489417 DOCK5Q9H7D0 1870 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 SUPT20HL2P0C7V6 817 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 TXNP10599 105 aaKnown RBP23.29■■□□□ 1.32
SND1-214ENST00000489417 BMP6P22004 513 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 PSMC4P43686 418 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 LACTBP83111 547 aaPredicted RBP23.29■■□□□ 1.32
SND1-214ENST00000489417 UGCGQ16739 394 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 FAM200AQ8TCP9 573 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 PIGOQ8TEQ8 1089 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 APBA2Q99767 749 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 BHMT2Q9H2M3 363 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 MLXIPQ9HAP2 919 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 GRPEL1Q9HAV7 217 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 BMP2KQ9NSY1 1161 aaPredicted RBP23.29■■□□□ 1.32
SND1-214ENST00000489417 RNF186Q9NXI6 227 aa23.29■■□□□ 1.32
SND1-214ENST00000489417 DKC1O60832 514 aaKnown RBP eCLIP23.28■■□□□ 1.32
SND1-214ENST00000489417 ATG7O95352 703 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 CYP11B2P19099 503 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 CYP2B6P20813 491 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 ZNF165P49910 485 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 KMT5BQ4FZB7 885 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 CELF3Q5SZQ8 465 aaKnown RBP23.28■■□□□ 1.32
SND1-214ENST00000489417 DYMQ7RTS9 669 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 C4orf19Q8IY42 314 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 DDX12PQ92771 950 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 NAT10Q9H0A0 1025 aaKnown RBP23.28■■□□□ 1.32
SND1-214ENST00000489417 ABHD16BQ9H3Z7 469 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 GABBR1Q9UBS5 961 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 MGAMO43451 1857 aa23.28■■□□□ 1.32
SND1-214ENST00000489417 PVALEFA0A1B0GWK0 134 aa23.27■■□□□ 1.32
SND1-214ENST00000489417 TRPA1O75762 1119 aa23.27■■□□□ 1.32
SND1-214ENST00000489417 MRE11P49959 708 aa23.27■■□□□ 1.32
SND1-214ENST00000489417 MLKLQ8NB16 471 aa23.27■■□□□ 1.32
SND1-214ENST00000489417 ATP6V0A1Q93050 837 aa23.27■■□□□ 1.32
SND1-214ENST00000489417 ARHGAP39Q9C0H5 1083 aa23.27■■□□□ 1.32
SND1-214ENST00000489417 CBX8Q9HC52 389 aa23.27■■□□□ 1.32
SND1-214ENST00000489417 ZBTB39O15060 712 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 RHOBTB3O94955 611 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 SP3Q02447 781 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 ACVR2BQ13705 512 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 OLFML2BQ68BL8 750 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 SWSAP1Q6NVH7 229 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 UNC13DQ70J99 1090 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 DHX37Q8IY37 1157 aaKnown RBP23.26■■□□□ 1.31
SND1-214ENST00000489417 DNAJC19Q96DA6 116 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 TRIM47Q96LD4 638 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 EXOC1Q9NV70 894 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 FLRT1Q9NZU1 646 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 DACH1Q9UI36 760 aa23.26■■□□□ 1.31
SND1-214ENST00000489417 DBR1Q9UK59 544 aaKnown RBP23.26■■□□□ 1.31
SND1-214ENST00000489417 GSTTP1A0A1W2PQM5 241 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 BACH1O14867 736 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 KRT18P05783 430 aaKnown RBP23.25■■□□□ 1.31
SND1-214ENST00000489417 XRCC6P12956 609 aaKnown RBP eCLIP23.25■■□□□ 1.31
SND1-214ENST00000489417 KIF22Q14807 665 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 ARSHQ5FYA8 562 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 L1TD1Q5T7N2 865 aaKnown RBP23.25■■□□□ 1.31
SND1-214ENST00000489417 ZNF658Q5TYW1 1059 aaPredicted RBP23.25■■□□□ 1.31
SND1-214ENST00000489417 CCDC60Q8IWA6 550 aaPredicted RBP23.25■■□□□ 1.31
SND1-214ENST00000489417 SEPT1Q8WYJ6 367 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 COPS5Q92905 334 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 ZHX1Q9UKY1 873 aaPredicted RBP23.25■■□□□ 1.31
SND1-214ENST00000489417 ZSWIM8A7E2V4 1837 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 IGSF9BQ9UPX0 1349 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 ARHGEF35A5YM69 484 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 IDEP14735 1019 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 ADCYAP1R1P41586 468 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 IRF5Q13568 498 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 CCL14Q16627 93 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 BPIFA3Q9BQP9 254 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 RUSC1Q9BVN2 902 aa23.25■■□□□ 1.31
SND1-214ENST00000489417 GTPBP4Q9BZE4 634 aaKnown RBP23.25■■□□□ 1.31
SND1-214ENST00000489417 ANKEF1Q9NU02 776 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms