RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 HDAC6Q9UBN7 1215 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 BOLA1Q9Y3E2 137 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 C2orf16Q68DN1 1984 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 KIAA1217Q5T5P2 1943 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 PCNX2A6NKB5 2137 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 TSC2P49815 1807 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 RBM47A0AV96 593 aaKnown RBP9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 HRO43593 1189 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 GP1BBP13224 206 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 THPOP40225 353 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 PPP4CP60510 307 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 CFHR1Q03591 330 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 FLIIQ13045 1269 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 PTPN14Q15678 1187 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 ATP2B3Q16720 1220 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 KANK3Q6NY19 840 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 C12orf76Q8N812 135 aaPredicted RBP9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 CLDN23Q96B33 292 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 MYADMQ96S97 322 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 STK31Q9BXU1 1019 aa9.12□□□□□ -0.95
EXOSC3-206ENST00000489414 LRRK2Q5S007 2527 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 IL16Q14005 1332 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 COL5A1P20908 1838 aaPredicted RBP9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 FAM170BA6NMN3 283 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 CAPN9O14815 690 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 N4BP1O75113 896 aaKnown RBP9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 BAG3O95817 575 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 POU3F2P20265 443 aaPredicted RBP9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 RPS9P46781 194 aaKnown RBP9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 SLC4A3P48751 1232 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 MTAPQ13126 283 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 FKBP5Q13451 457 aaPredicted RBP9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 UBXN2BQ14CS0 331 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 CPXCR1Q8N123 301 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 FAM181AQ8N9Y4 354 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 NOL10Q9BSC4 688 aaKnown RBP9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 ARRDC1-AS1Q9H2J1 176 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 SH2D4AQ9H788 454 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 A1CFQ9NQ94 594 aaKnown RBP9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 LOXHD1Q8IVV2 1947 aa9.11□□□□□ -0.95
EXOSC3-206ENST00000489414 MGAQ8IWI9 3026 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 NKRFO15226 690 aaKnown RBP eCLIP9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 FGF18O76093 207 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 CSRP3P50461 194 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 APOBRQ0VD83 1088 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 SRSF5Q13243 272 aaKnown RBP9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 PLA2G2CQ5R387 149 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 DAB2IPQ5VWQ8 1189 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 SERINC5Q86VE9 423 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 CLEC10AQ8IUN9 316 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 ZNF710Q8N1W2 664 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 TSPYL6Q8N831 410 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 C7orf31Q8N865 590 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 NXPE3Q969Y0 559 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 TCF25Q9BQ70 676 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 SLF1Q9BQI6 1058 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 BICC1Q9H694 974 aaKnown RBP9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 ARHGEF10LQ9HCE6 1279 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 LTB4R2Q9NPC1 389 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 JADE2Q9NQC1 790 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 ANKMY1Q9P2S6 941 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
EXOSC3-206ENST00000489414 FLNCQ14315 2725 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 A0A087WV48 116 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 C4orf47A7E2U8 309 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 EYA2O00167 538 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 MPHOSPH10O00566 681 aaKnown RBP9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 ADORA1P30542 326 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 CNR2P34972 360 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 HIC1Q14526 733 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 FAM83BQ5T0W9 1011 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 TMEM179Q6ZVK1 233 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 ANKRD44Q8N8A2 993 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 MDM1Q8TC05 714 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 RAVER2Q9HCJ3 691 aaKnown RBP9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 NGRNQ9NPE2 291 aaKnown RBP9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 DZANK1Q9NVP4 752 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 TMEM260Q9NX78 707 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 RAI14Q9P0K7 980 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 EPS15L1Q9UBC2 864 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 LZTS1Q9Y250 596 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 PCDHB12Q9Y5F1 795 aa9.09□□□□□ -0.95
EXOSC3-206ENST00000489414 ASCC3Q8N3C0 2202 aaKnown RBP9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 ITPR2Q14571 2701 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 PCNX1Q96RV3 2341 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 PLXNB3Q9ULL4 1909 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 EPN2O95208 641 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 FGD1P98174 961 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 PRKCQQ04759 706 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 ICA1Q05084 483 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 GABPAQ06546 454 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 SNW1Q13573 536 aaKnown RBP9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 PPP2R5BQ15173 497 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 LETM2Q2VYF4 491 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 PAN2Q504Q3 1202 aaKnown RBP9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 ZBTB41Q5SVQ8 909 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 TBC1D9Q6ZT07 1266 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 ADGRA1Q86SQ6 560 aa9.08□□□□□ -0.96
EXOSC3-206ENST00000489414 COPS5Q92905 334 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms