RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TMEM177Q53S58 311 aa7.01□□□□□ -1.29
VPS8-224ENST00000488255 UBXN11Q5T124 520 aa7.01□□□□□ -1.29
VPS8-224ENST00000488255 HOMER1Q86YM7 354 aa7.01□□□□□ -1.29
VPS8-224ENST00000488255 ZCCHC14Q8WYQ9 949 aaKnown RBP7.01□□□□□ -1.29
VPS8-224ENST00000488255 WRNIP1Q96S55 665 aa7.01□□□□□ -1.29
VPS8-224ENST00000488255 HSPBP1Q9NZL4 362 aa7.01□□□□□ -1.29
VPS8-224ENST00000488255 FTSJ1Q9UET6 329 aa7.01□□□□□ -1.29
VPS8-224ENST00000488255 CD2APQ9Y5K6 639 aa7.01□□□□□ -1.29
VPS8-224ENST00000488255 DUSP10Q9Y6W6 482 aa7.01□□□□□ -1.29
VPS8-224ENST00000488255 MROH6A6NGR9 719 aa7□□□□□ -1.29
VPS8-224ENST00000488255 M0R2C6 588 aa7□□□□□ -1.29
VPS8-224ENST00000488255 KCNQ2O43526 872 aa7□□□□□ -1.29
VPS8-224ENST00000488255 DNAJC8O75937 253 aaPredicted RBP7□□□□□ -1.29
VPS8-224ENST00000488255 GJA4P35212 333 aa7□□□□□ -1.29
VPS8-224ENST00000488255 PABPC4Q13310 644 aaKnown RBP eCLIP7□□□□□ -1.29
VPS8-224ENST00000488255 TMEM132BQ14DG7 1078 aa7□□□□□ -1.29
VPS8-224ENST00000488255 SEC23AQ15436 765 aa7□□□□□ -1.29
VPS8-224ENST00000488255 PKN3Q6P5Z2 889 aa7□□□□□ -1.29
VPS8-224ENST00000488255 OVCH1Q7RTY7 1134 aa7□□□□□ -1.29
VPS8-224ENST00000488255 DDX53Q86TM3 631 aaKnown RBP7□□□□□ -1.29
VPS8-224ENST00000488255 RELTQ969Z4 430 aa7□□□□□ -1.29
VPS8-224ENST00000488255 LCORQ96JN0 433 aaPredicted RBP7□□□□□ -1.29
VPS8-224ENST00000488255 TMEM168Q9H0V1 697 aa7□□□□□ -1.29
VPS8-224ENST00000488255 SAMD15Q9P1V8 674 aa7□□□□□ -1.29
VPS8-224ENST00000488255 ZDHHC9Q9Y397 364 aa7□□□□□ -1.29
VPS8-224ENST00000488255 SLC12A8A0AV02 714 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 PRICKLE3O43900 615 aaPredicted RBP6.99□□□□□ -1.29
VPS8-224ENST00000488255 CLASP2O75122 1294 aaKnown RBP6.99□□□□□ -1.29
VPS8-224ENST00000488255 C4BPAP04003 597 aaKnown RBP6.99□□□□□ -1.29
VPS8-224ENST00000488255 MC4RP32245 332 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 IGFALSP35858 605 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 FAM26FQ5R3K3 315 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 FRMD5Q7Z6J6 570 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 FAM124AQ86V42 546 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 JAZF1Q86VZ6 243 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 IGDCC4Q8TDY8 1250 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 APPBP2Q92624 585 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 PDGFDQ9GZP0 370 aaPredicted RBP6.99□□□□□ -1.29
VPS8-224ENST00000488255 RTEL1Q9NZ71 1219 aa6.99□□□□□ -1.29
VPS8-224ENST00000488255 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 GLRX3O76003 335 aaKnown RBP6.98□□□□□ -1.29
VPS8-224ENST00000488255 IL18BPO95998 194 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 ASLP04424 464 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 MMEP08473 750 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 JMJD7P0C870 316 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 IRF9Q00978 393 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 KIAA2012Q0VF49 1180 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 TCEA2Q15560 299 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 SMAD2Q15796 467 aaKnown RBP6.98□□□□□ -1.29
VPS8-224ENST00000488255 TKFCQ3LXA3 575 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 TM4SF20Q53R12 229 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 PIK3R6Q5UE93 754 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 ZCCHC8Q6NZY4 707 aaKnown RBP6.98□□□□□ -1.29
VPS8-224ENST00000488255 HHIPL2Q6UWX4 724 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 NOSTRINQ8IVI9 506 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 NUDT10Q8NFP7 164 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 ERCC4Q92889 916 aaPredicted RBP6.98□□□□□ -1.29
VPS8-224ENST00000488255 NUDT11Q96G61 164 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 YTHDC1Q96MU7 727 aaKnown RBP6.98□□□□□ -1.29
VPS8-224ENST00000488255 UCKL1Q9NWZ5 548 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 RAPGEFL1Q9UHV5 662 aa6.98□□□□□ -1.29
VPS8-224ENST00000488255 FOXD2O60548 495 aaPredicted RBP6.97□□□□□ -1.29
VPS8-224ENST00000488255 HIP1RO75146 1068 aa6.97□□□□□ -1.29
VPS8-224ENST00000488255 HIPK4Q8NE63 616 aa6.97□□□□□ -1.29
VPS8-224ENST00000488255 TEPSINQ96N21 525 aa6.97□□□□□ -1.29
VPS8-224ENST00000488255 BDH2Q9BUT1 245 aa6.97□□□□□ -1.29
VPS8-224ENST00000488255 B4E1Z4 1266 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 CDC45O75419 566 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 NPTXRO95502 500 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 COL6A1P12109 1028 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 PTGS1P23219 599 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 CFAP100Q494V2 611 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 CNNM4Q6P4Q7 775 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 BORAQ6PGQ7 559 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 C16orf86Q6ZW13 317 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 UBE2R2Q712K3 238 aaPredicted RBP6.96□□□□□ -1.3
VPS8-224ENST00000488255 GBP4Q96PP9 640 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 KCNH7Q9NS40 1196 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 KCND1Q9NSA2 647 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 INVSQ9Y283 1065 aa6.96□□□□□ -1.3
VPS8-224ENST00000488255 PRAMEF22A3QJZ6 481 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 FOXP2O15409 715 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 KNG1P01042 644 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 AOAHP28039 575 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 FLT3P36888 993 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 NEK4P51957 841 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 CDCA2Q69YH5 1023 aaPredicted RBP6.95□□□□□ -1.3
VPS8-224ENST00000488255 GPR155Q7Z3F1 870 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 DHX37Q8IY37 1157 aaKnown RBP6.95□□□□□ -1.3
VPS8-224ENST00000488255 WDR48Q8TAF3 677 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 WNK4Q96J92 1243 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 BOCQ9BWV1 1114 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 BARX1Q9HBU1 254 aaPredicted RBP6.95□□□□□ -1.3
VPS8-224ENST00000488255 CABP5Q9NP86 173 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 INCENPQ9NQS7 918 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 ZNF536O15090 1300 aa6.95□□□□□ -1.3
VPS8-224ENST00000488255 TTBK1Q5TCY1 1321 aaPredicted RBP6.95□□□□□ -1.3
VPS8-224ENST00000488255 PTPDC1A2A3K4 754 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 H0Y858 1186 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 B4GALT4O60513 344 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms