RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 NFXL1Q6ZNB6 911 aa6.38□□□□□ -1.39
R3HDM1-218ENST00000487294 HDXQ7Z353 690 aa6.38□□□□□ -1.39
R3HDM1-218ENST00000487294 POU5F2Q8N7G0 328 aa6.38□□□□□ -1.39
R3HDM1-218ENST00000487294 ZKSCAN4Q969J2 545 aaPredicted RBP6.38□□□□□ -1.39
R3HDM1-218ENST00000487294 WRNIP1Q96S55 665 aa6.38□□□□□ -1.39
R3HDM1-218ENST00000487294 PUS3Q9BZE2 481 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-218ENST00000487294 PICK1Q9NRD5 415 aa6.38□□□□□ -1.39
R3HDM1-218ENST00000487294 VTI1BQ9UEU0 232 aa6.38□□□□□ -1.39
R3HDM1-218ENST00000487294 JAG2Q9Y219 1238 aa6.38□□□□□ -1.39
R3HDM1-218ENST00000487294 COL6A3P12111 3177 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 ZSWIM8A7E2V4 1837 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 PDHXO00330 501 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 GFRA2O00451 464 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 CXCL11O14625 94 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 PLIN1O60240 522 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 NBPF7P0C2Y1 421 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 RLBP1P12271 317 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 FGFR2P21802 821 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 PSMC4P43686 418 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 EXOSC9Q06265 439 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 CAVIN4Q5BKX8 364 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 WIPI1Q5MNZ9 446 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 TP53INP2Q8IXH6 220 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 TOP6BLQ8N6T0 577 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 AGBL5Q8NDL9 886 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 GIPC2Q8TF65 315 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 FAM151AQ8WW52 585 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 HTATIP2Q9BUP3 242 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 ZNF341Q9BYN7 854 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 C9orf78Q9NZ63 289 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 TMOD2Q9NZR1 351 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 SLC45A1Q9Y2W3 748 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 U3KQE9 123 aa6.37□□□□□ -1.39
R3HDM1-218ENST00000487294 ATRNL1Q5VV63 1379 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 MYPNQ86TC9 1320 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 SGPL1O95470 568 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 CCL5P13501 91 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 CCDC184Q52MB2 194 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 VPS37DQ86XT2 251 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 ANKRD44Q8N8A2 993 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 PHC3Q8NDX5 983 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 WDR66Q8TBY9 1149 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 ZNF507Q8TCN5 953 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 SUCLG2Q96I99 432 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 PARK7Q99497 189 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 WNT10AQ9GZT5 417 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 MIR1-1HGQ9H1L0 117 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 FBRSQ9HAH7 460 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 PAK6Q9NQU5 681 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 NR2E3Q9Y5X4 410 aa6.36□□□□□ -1.39
R3HDM1-218ENST00000487294 RFX7Q2KHR2 1363 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 SALL1Q9NSC2 1324 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 A0A0G2JLL6 359 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 BMP8BP34820 402 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 CACNB3P54284 484 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 UBXN2AP68543 259 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 SLBPQ14493 270 aaKnown RBP eCLIP6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 PUM3Q15397 648 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 LRRC24Q50LG9 513 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 METTL24Q5JXM2 366 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 FAM214BQ7L5A3 538 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 FASTKD5Q7L8L6 764 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 PRRT2Q7Z6L0 340 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 FAM181AQ8N9Y4 354 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 KCT2Q8NC54 265 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 FLCNQ8NFG4 579 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 RAET1EQ8TD07 263 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 U2AF1L4Q8WU68 220 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 LPIN2Q92539 896 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 DPF3Q92784 378 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 IDI2Q9BXS1 227 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 BICC1Q9H694 974 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 CPA4Q9UI42 421 aa6.35□□□□□ -1.39
R3HDM1-218ENST00000487294 MGAMO43451 1857 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 ENTPD3O75355 529 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 FRAT2O75474 233 aaPredicted RBP6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 FARP2O94887 1054 aaPredicted RBP6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 C8AP07357 584 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 IFIT1P09914 478 aaKnown RBP6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 RFX5P48382 616 aaPredicted RBP6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 MFAP1P55081 439 aaKnown RBP6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 PRKCZQ05513 592 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 CHAF1AQ13111 956 aaPredicted RBP6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 MRPL58Q14197 206 aaKnown RBP6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 NKG7Q16617 165 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 TSNAXIP1Q2TAA8 658 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 CDC42EP5Q6NZY7 148 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 MIGA2Q7L4E1 593 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 ARMCX6Q7L4S7 300 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 SCYL3Q8IZE3 742 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 HEXIM2Q96MH2 286 aaKnown RBP6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 USP44Q9H0E7 712 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 AFG3L2Q9Y4W6 797 aa6.34□□□□□ -1.39
R3HDM1-218ENST00000487294 PTPRFP10586 1907 aa6.33□□□□□ -1.4
R3HDM1-218ENST00000487294 GAKO14976 1311 aa6.33□□□□□ -1.4
R3HDM1-218ENST00000487294 PTPRCP08575 1304 aa6.33□□□□□ -1.4
R3HDM1-218ENST00000487294 PDS5AQ29RF7 1337 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-218ENST00000487294 ZNF521Q96K83 1311 aa6.33□□□□□ -1.4
R3HDM1-218ENST00000487294 EYA2O00167 538 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms