RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TACO1Q9BSH4 297 aaKnown RBP13.55□□□□□ -0.24
HSPG2-211ENST00000486901 TMOD4Q9NZQ9 345 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 RTCBQ9Y3I0 505 aaKnown RBP13.55□□□□□ -0.24
HSPG2-211ENST00000486901 CTNND1O60716 968 aaKnown RBP13.55□□□□□ -0.24
HSPG2-211ENST00000486901 FGGP02679 453 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 KRT13P13646 458 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 CASP4P49662 377 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 FKBP3Q00688 224 aaKnown RBP13.55□□□□□ -0.24
HSPG2-211ENST00000486901 SLC18A3Q16572 532 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 RAD54LQ92698 747 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 SEC16BQ96JE7 1060 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 ODF2LQ9ULJ1 636 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 SUFUQ9UMX1 484 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 SNX24Q9Y343 169 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 L3MBTL1Q9Y468 752 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 FAM107AO95990 144 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 PSMC6P62333 389 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 ALKBH5Q6P6C2 394 aaKnown RBP13.54□□□□□ -0.24
HSPG2-211ENST00000486901 MICALCLQ6ZW33 695 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 TBC1D1Q86TI0 1168 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-211ENST00000486901 NBPF5PQ86XG9 351 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-211ENST00000486901 LBHD1Q9BQE6 289 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-211ENST00000486901 CAND2O75155 1236 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 CCDC172P0C7W6 258 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 GNA11P29992 359 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 CDK8P49336 464 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 SHROOM1Q2M3G4 852 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-211ENST00000486901 ACCSLQ4AC99 568 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 ZMYND12Q9H0C1 365 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 TMBIM4Q9HC24 238 aa13.54□□□□□ -0.24
HSPG2-211ENST00000486901 BSDC1Q9NW68 430 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-211ENST00000486901 DUOX1Q9NRD9 1551 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 SPDYE3A6NKU9 549 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 RSPH10B2B2RC85 870 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 KIF4AO95239 1232 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 RSPH10BP0C881 870 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 NF2P35240 595 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 GUF1Q8N442 669 aaKnown RBP13.53□□□□□ -0.24
HSPG2-211ENST00000486901 PTPN22Q9Y2R2 807 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 PALM3A6NDB9 673 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-211ENST00000486901 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-211ENST00000486901 VIMP08670 466 aaKnown RBP13.53□□□□□ -0.24
HSPG2-211ENST00000486901 EPB41P11171 864 aaKnown RBP13.53□□□□□ -0.24
HSPG2-211ENST00000486901 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 CYB5D1Q6P9G0 228 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 TPX2Q9ULW0 747 aaKnown RBP13.53□□□□□ -0.24
HSPG2-211ENST00000486901 LRRN2O75325 713 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 FGRP09769 529 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 MYBL1P10243 752 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 ECHS1P30084 290 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 NAA25Q14CX7 972 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 TEX11Q8IYF3 940 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 ELAC2Q9BQ52 826 aaKnown RBP13.53□□□□□ -0.24
HSPG2-211ENST00000486901 VCPKMTQ9H867 229 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 CEP72Q9P209 647 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 PCDHA12Q9UN75 941 aa13.53□□□□□ -0.24
HSPG2-211ENST00000486901 HNRNPH3P31942 346 aaKnown RBP13.52□□□□□ -0.24
HSPG2-211ENST00000486901 BTDP43251 543 aa13.52□□□□□ -0.24
HSPG2-211ENST00000486901 GNAQP50148 359 aa13.52□□□□□ -0.24
HSPG2-211ENST00000486901 IFI35P80217 286 aaPredicted RBP13.52□□□□□ -0.24
HSPG2-211ENST00000486901 FIGNQ5HY92 759 aa13.52□□□□□ -0.24
HSPG2-211ENST00000486901 FBXO33Q7Z6M2 555 aa13.52□□□□□ -0.24
HSPG2-211ENST00000486901 FAM228AQ86W67 206 aa13.52□□□□□ -0.24
HSPG2-211ENST00000486901 GLYCTKQ8IVS8 523 aa13.52□□□□□ -0.24
HSPG2-211ENST00000486901 CACNA2D3Q8IZS8 1091 aa13.52□□□□□ -0.24
HSPG2-211ENST00000486901 ADAM33Q9BZ11 813 aa13.52□□□□□ -0.24
HSPG2-211ENST00000486901 DDX25Q9UHL0 483 aaKnown RBP13.52□□□□□ -0.24
HSPG2-211ENST00000486901 EDIL3O43854 480 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 PRLRP16471 622 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 CDK17Q00537 523 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 PARP10Q53GL7 1025 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 ZNF662Q6ZS27 426 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 KIF2BQ8N4N8 673 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
HSPG2-211ENST00000486901 YY1AP1Q9H869 796 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 BMP2KQ9NSY1 1161 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-211ENST00000486901 EMILIN3Q9NT22 766 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 COL18A1P39060 1754 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 AK8Q96MA6 479 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 HDAC9Q9UKV0 1011 aa13.52□□□□□ -0.25
HSPG2-211ENST00000486901 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 HMGB1P1B2RPK0 211 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-211ENST00000486901 FSBPO95073 299 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 FGFR4P22455 802 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 PAX7P23759 505 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 RFC4P35249 363 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 ADCY7P51828 1080 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 ZKSCAN8Q15776 578 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-211ENST00000486901 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-211ENST00000486901 PHLDB2Q86SQ0 1253 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 CPNE8Q86YQ8 564 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 HVCN1Q96D96 273 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 MXD3Q9BW11 206 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 DBR1Q9UK59 544 aaKnown RBP13.51□□□□□ -0.25
HSPG2-211ENST00000486901 STK38LQ9Y2H1 464 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 FGFR1OPO95684 399 aaKnown RBP13.51□□□□□ -0.25
HSPG2-211ENST00000486901 MYBP10242 640 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms