RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 ARHGAP20Q9P2F6 1191 aa13.48□□□□□ -0.25
SHROOM3-208ENST00000486758 AMACRQ9UHK6 382 aa13.48□□□□□ -0.25
SHROOM3-208ENST00000486758 FAM237AA0A1B0GTK4 181 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 GCNT3O95395 438 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 MYBL1P10243 752 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 VWA3BQ502W6 1294 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 OTUD6AQ7L8S5 288 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 FAM167BQ9BTA0 163 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 TRIM9Q9C026 710 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 SERPINB13Q9UIV8 391 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 A6NNZ2 444 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 OPLAHO14841 1288 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 EPHB6O15197 1021 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 RAD51CO43502 376 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 PAX7P23759 505 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 TUBB8Q3ZCM7 444 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 CCDC65Q8IXS2 484 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 CPXCR1Q8N123 301 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 AENQ8WTP8 325 aaKnown RBP13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 GSTTP1A0A1W2PQM5 241 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 POTECB2RU33 542 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 DAPK3O43293 454 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 SSR1P43307 286 aaKnown RBP13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 GRM4Q14833 912 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 ARL6IP4Q66PJ3 421 aaKnown RBP13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 RCSD1Q6JBY9 416 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 POTEBQ6S5H4 581 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 KCNV2Q8TDN2 545 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 FBXL5Q9UKA1 691 aa13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 UTP11Q9Y3A2 253 aaKnown RBP13.47□□□□□ -0.25
SHROOM3-208ENST00000486758 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 PCP11498 1178 aaKnown RBP13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 COPB2P35606 906 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 PLTPP55058 493 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 ARHGAP44Q17R89 818 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 CCDC38Q502W7 563 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 HVCN1Q96D96 273 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 DHTKD1Q96HY7 919 aaPredicted RBP13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 DNAJC7Q99615 494 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 LEMD3Q9Y2U8 911 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 MRC1P22897 1456 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 STXBP3O00186 592 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 CASKIN2Q8WXE0 1202 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 SH2D3AQ9BRG2 576 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 DNAJC17Q9NVM6 304 aaKnown RBP13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 TMOD2Q9NZR1 351 aa13.46□□□□□ -0.25
SHROOM3-208ENST00000486758 KLRC1P26715 233 aa13.46□□□□□ -0.26
SHROOM3-208ENST00000486758 SARNPP82979 210 aaKnown RBP13.46□□□□□ -0.26
SHROOM3-208ENST00000486758 ADAM9Q13443 819 aa13.46□□□□□ -0.26
SHROOM3-208ENST00000486758 LRRC14Q15048 493 aa13.46□□□□□ -0.26
SHROOM3-208ENST00000486758 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.26
SHROOM3-208ENST00000486758 U2AF1L4Q8WU68 220 aaKnown RBP13.46□□□□□ -0.26
SHROOM3-208ENST00000486758 A0A1W2PQC6 194 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 RETREG2Q8NC44 543 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 GLIS3Q8NEA6 775 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 ZKSCAN4Q969J2 545 aaPredicted RBP13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 PACSIN1Q9BY11 444 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 CELF4Q9BZC1 486 aaKnown RBP13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 THRAP3Q9Y2W1 955 aaKnown RBP13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 POTEFA5A3E0 1075 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 TCP10L2B9ZVM9 353 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 CETN3O15182 167 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 FAM13AO94988 1023 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 CYP2J2P51589 502 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 MAN2A1Q16706 1144 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 NBPF9Q3BBW0 867 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 CYB5D1Q6P9G0 228 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 POTEEQ6S8J3 1075 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 SPATS2Q86XZ4 545 aaKnown RBP13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 IRF2BP1Q8IU81 584 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 ANAPC4Q9UJX5 808 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 MYMKA6NI61 221 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 ZNF233A6NK53 670 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 ENO4A6NNW6 628 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 HMGB1P1B2RPK0 211 aaPredicted RBP13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 RGS16O15492 202 aaPredicted RBP13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 SLC37A4O43826 429 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 NEFHP12036 1026 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 VPS41P49754 854 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 SLFN13Q68D06 897 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 CCDC26Q8TAB7 109 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 PIGOQ8TEQ8 1089 aa13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 TRIM6Q9C030 488 aaPredicted RBP13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 PDS5AQ29RF7 1337 aaKnown RBP13.45□□□□□ -0.26
SHROOM3-208ENST00000486758 PSEN1P49768 467 aa13.44□□□□□ -0.26
SHROOM3-208ENST00000486758 MMGT1Q8N4V1 131 aa13.44□□□□□ -0.26
SHROOM3-208ENST00000486758 PTPN22Q9Y2R2 807 aa13.44□□□□□ -0.26
SHROOM3-208ENST00000486758 FLT1P17948 1338 aa13.44□□□□□ -0.26
SHROOM3-208ENST00000486758 NR2F2P24468 414 aa13.44□□□□□ -0.26
SHROOM3-208ENST00000486758 CERKLQ49MI3 558 aaPredicted RBP13.44□□□□□ -0.26
SHROOM3-208ENST00000486758 PRR5LQ6MZQ0 368 aa13.44□□□□□ -0.26
SHROOM3-208ENST00000486758 CCDC197Q8NCU1 140 aa13.44□□□□□ -0.26
SHROOM3-208ENST00000486758 ERMNQ8TAM6 284 aa13.44□□□□□ -0.26
SHROOM3-208ENST00000486758 TEKT1Q969V4 418 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms