RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CPSF2Q9P2I0 782 aaKnown RBP11.61□□□□□ -0.55
CCDC171-208ENST00000486641 LRP2BPQ9P2M1 347 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 STK38LQ9Y2H1 464 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 THRAP3Q9Y2W1 955 aaKnown RBP11.61□□□□□ -0.55
CCDC171-208ENST00000486641 ALS2Q96Q42 1657 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 CCDC188H7C350 402 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 EVI5O60447 810 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 FGFR1OPO95684 399 aaKnown RBP11.61□□□□□ -0.55
CCDC171-208ENST00000486641 FESP07332 822 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 ATP4AP20648 1035 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 AMPD3Q01432 767 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 KLHL30Q0D2K2 578 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 RAPGEF1Q13905 1077 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 IFI16Q16666 785 aaKnown RBP11.61□□□□□ -0.55
CCDC171-208ENST00000486641 MAEAQ7L5Y9 396 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 HOOK3Q86VS8 718 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 FAM133AQ8N9E0 248 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 LRRC57Q8N9N7 239 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 LSM14BQ9BX40 385 aaKnown RBP11.61□□□□□ -0.55
CCDC171-208ENST00000486641 FAM114A2Q9NRY5 505 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 ADAM22Q9P0K1 906 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 ZFATQ9P243 1243 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 UTP11Q9Y3A2 253 aaKnown RBP11.61□□□□□ -0.55
CCDC171-208ENST00000486641 CD2APQ9Y5K6 639 aa11.61□□□□□ -0.55
CCDC171-208ENST00000486641 SMIM23A6NLE4 172 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 SNX3O60493 162 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 SLC5A1P13866 664 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 IFNAR2P48551 515 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 BCAMP50895 628 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 CCNG1P51959 295 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 GRIPAP1Q4V328 841 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 DZIP3Q86Y13 1208 aaKnown RBP11.6□□□□□ -0.55
CCDC171-208ENST00000486641 KCNV2Q8TDN2 545 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 ATP8B4Q8TF62 1192 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 KLHL29Q96CT2 875 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 FMO2Q99518 471 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 TRIM51Q9BSJ1 452 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 SLITRK6Q9H5Y7 841 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 AZI2Q9H6S1 392 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 DUOX1Q9NRD9 1551 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 BTNL10A8MVZ5 291 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 AHCYL1O43865 530 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
CCDC171-208ENST00000486641 PRPHP41219 470 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 MSH2P43246 934 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 COPS2P61201 443 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 EVX2Q03828 476 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 BNIP1Q12981 228 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 LRRC41Q15345 812 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 TAF11Q15544 211 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 DYMQ7RTS9 669 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 GLIS3Q8NEA6 775 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 RNF25Q96BH1 459 aaPredicted RBP11.6□□□□□ -0.55
CCDC171-208ENST00000486641 PGM2Q96G03 612 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 NLRP3Q96P20 1036 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 OSBPL1AQ9BXW6 950 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 ARHGEF3Q9NR81 526 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 TRIM33Q9UPN9 1127 aa11.6□□□□□ -0.55
CCDC171-208ENST00000486641 MAGEB6P1A0A0J9YX57 407 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 DPPA5A6NC42 116 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 MYMKA6NI61 221 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 STXBP3O00186 592 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 IRS4O14654 1257 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 TECP42680 631 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 RPS6KA3P51812 740 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 POU5F1Q01860 360 aaKnown RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 LRRC63Q05C16 580 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 FAM47AQ5JRC9 791 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 SPDYCQ5MJ68 293 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 SLC30A9Q6PML9 568 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 RASGEF1CQ8N431 466 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 GUF1Q8N442 669 aaKnown RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 NAF1Q96HR8 494 aaKnown RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 AK8Q96MA6 479 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 MMTAG2Q9BU76 263 aaKnown RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 RAB17Q9H0T7 212 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 KANSL2Q9H9L4 492 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 GOPCQ9HD26 462 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 AIPL1Q9NZN9 384 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 PNMA3Q9UL41 463 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 DLEC1Q9Y238 1755 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 TNS3Q68CZ2 1445 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 LAD1O00515 517 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 RGS16O15492 202 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 LUC7L3O95232 432 aaKnown RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 OAS1P00973 400 aaKnown RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 NUDT17P0C025 328 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 NEFHP12036 1026 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 CTCFP49711 727 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 ZNF131P52739 623 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 PMS2P54278 862 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 TRAF1Q13077 416 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 TMED8Q6PL24 325 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 KRT28Q7Z3Y7 464 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 NLRP10Q86W26 655 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 ZMYND12Q9H0C1 365 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 NSRP1Q9H0G5 558 aaKnown RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 SH3GLB2Q9NR46 395 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms