RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 RASEFQ8IZ41 740 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 IL17RAQ96F46 866 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 RIC8AQ9NPQ8 531 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 SLC9A2Q9UBY0 812 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 CDY2AQ9Y6F7 541 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 V9GY48 417 aaPredicted RBP22.01■■□□□ 1.11
COL27A1-205ENST00000485397 BDP1A6H8Y1 2624 aa22■■□□□ 1.11
COL27A1-205ENST00000485397 ENPP3O14638 875 aa22■■□□□ 1.11
COL27A1-205ENST00000485397 ADCK5Q3MIX3 580 aa22■■□□□ 1.11
COL27A1-205ENST00000485397 FBXO47Q5MNV8 452 aa22■■□□□ 1.11
COL27A1-205ENST00000485397 DHX32Q7L7V1 743 aaKnown RBP22■■□□□ 1.11
COL27A1-205ENST00000485397 GADD45GIP1Q8TAE8 222 aaPredicted RBP22■■□□□ 1.11
COL27A1-205ENST00000485397 KHSRPQ92945 711 aaKnown RBP eCLIP22■■□□□ 1.11
COL27A1-205ENST00000485397 C1QTNF1Q9BXJ1 281 aa22■■□□□ 1.11
COL27A1-205ENST00000485397 FAM49AQ9H0Q0 323 aaPredicted RBP22■■□□□ 1.11
COL27A1-205ENST00000485397 CD320Q9NPF0 282 aa22■■□□□ 1.11
COL27A1-205ENST00000485397 RRN3P2A6NIE6 340 aa21.99■■□□□ 1.11
COL27A1-205ENST00000485397 ZBTB43O43298 467 aa21.99■■□□□ 1.11
COL27A1-205ENST00000485397 LEXMQ3ZCV2 418 aa21.99■■□□□ 1.11
COL27A1-205ENST00000485397 FIBCD1Q8N539 461 aa21.99■■□□□ 1.11
COL27A1-205ENST00000485397 BANK1Q8NDB2 785 aa21.99■■□□□ 1.11
COL27A1-205ENST00000485397 ANO3Q9BYT9 981 aa21.99■■□□□ 1.11
COL27A1-205ENST00000485397 AGO3Q9H9G7 860 aaKnown RBP21.99■■□□□ 1.11
COL27A1-205ENST00000485397 TMEM260Q9NX78 707 aa21.99■■□□□ 1.11
COL27A1-205ENST00000485397 SMCO2A6NFE2 343 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 STXBP3O00186 592 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 ADCY7P51828 1080 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 ACTR2P61160 394 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 MRPS6P82932 125 aaKnown RBP21.98■■□□□ 1.11
COL27A1-205ENST00000485397 ITGB3BPQ13352 177 aaPredicted RBP21.98■■□□□ 1.11
COL27A1-205ENST00000485397 PLCB4Q15147 1175 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 TIGD5Q53EQ6 642 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 TCEAL5Q5H9L2 206 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 PPP1R18Q6NYC8 613 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 TRAPPC12Q8WVT3 735 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 SDF4Q9BRK5 362 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 AZI2Q9H6S1 392 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 FAM217BQ9NTX9 383 aaPredicted RBP21.98■■□□□ 1.11
COL27A1-205ENST00000485397 TRPC6Q9Y210 931 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 NFASCO94856 1347 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 COL4A6Q14031 1691 aa21.98■■□□□ 1.11
COL27A1-205ENST00000485397 KLF18A0A0U1RQI7 1052 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 GOLGA8AA7E2F4 631 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 GOLGA8BA8MQT2 603 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 FOSP01100 380 aaPredicted RBP21.97■■□□□ 1.11
COL27A1-205ENST00000485397 LINC00271P0C7V0 271 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 CDC27P30260 824 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 CD52P31358 61 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 CTNNB1P35222 781 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 TMEM62Q0P6H9 643 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 TSGA10IPQ3SY00 556 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 CEP55Q53EZ4 464 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 TSHZ1Q6ZSZ6 1077 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 LINC01599Q8WXQ3 324 aa21.97■■□□□ 1.11
COL27A1-205ENST00000485397 AGO4Q9HCK5 861 aaKnown RBP21.97■■□□□ 1.11
COL27A1-205ENST00000485397 IL9P15248 144 aa21.96■■□□□ 1.11
COL27A1-205ENST00000485397 STAT5BP51692 787 aa21.96■■□□□ 1.11
COL27A1-205ENST00000485397 RC3H2Q9HBD1 1191 aaKnown RBP21.96■■□□□ 1.11
COL27A1-205ENST00000485397 BARHL2Q9NY43 387 aa21.96■■□□□ 1.11
COL27A1-205ENST00000485397 ADGRA3Q8IWK6 1321 aa21.96■■□□□ 1.11
COL27A1-205ENST00000485397 H3BQ06 376 aaPredicted RBP21.95■■□□□ 1.1
COL27A1-205ENST00000485397 MEIS1O00470 390 aa21.95■■□□□ 1.1
COL27A1-205ENST00000485397 BMPR1AP36894 532 aa21.95■■□□□ 1.1
COL27A1-205ENST00000485397 CLK2P49760 499 aaKnown RBP21.95■■□□□ 1.1
COL27A1-205ENST00000485397 IER5Q5VY09 327 aa21.95■■□□□ 1.1
COL27A1-205ENST00000485397 PTCRAQ6ISU1 281 aaPredicted RBP21.95■■□□□ 1.1
COL27A1-205ENST00000485397 PLPPR4Q7Z2D5 763 aa21.95■■□□□ 1.1
COL27A1-205ENST00000485397 RTN4RL1Q86UN2 441 aaPredicted RBP21.95■■□□□ 1.1
COL27A1-205ENST00000485397 NEK9Q8TD19 979 aa21.95■■□□□ 1.1
COL27A1-205ENST00000485397 NSUN3Q9H649 340 aaKnown RBP21.95■■□□□ 1.1
COL27A1-205ENST00000485397 NAP1L2Q9ULW6 460 aaPredicted RBP21.95■■□□□ 1.1
COL27A1-205ENST00000485397 PCDHA2Q9Y5H9 948 aa21.95■■□□□ 1.1
COL27A1-205ENST00000485397 TRPV2Q9Y5S1 764 aa21.95■■□□□ 1.1
COL27A1-205ENST00000485397 MYO7AQ13402 2215 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 C5orf67F2Z3F1 127 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 hCG_1984214I3L0E3 225 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 DDX39AO00148 427 aaKnown RBP21.94■■□□□ 1.1
COL27A1-205ENST00000485397 RB1P06400 928 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 CPA1P15085 419 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 ZNF76P36508 570 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 SREBF1P36956 1147 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 JAKMIP3Q5VZ66 844 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 EP400NLQ6ZTU2 488 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 CENPQQ7L2Z9 268 aaPredicted RBP21.94■■□□□ 1.1
COL27A1-205ENST00000485397 FAM178BQ8IXR5 827 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 ZNF713Q8N859 430 aaPredicted RBP21.94■■□□□ 1.1
COL27A1-205ENST00000485397 ZNF689Q96CS4 500 aaPredicted RBP21.94■■□□□ 1.1
COL27A1-205ENST00000485397 LRFN3Q9BTN0 628 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 NLRC5Q86WI3 1866 aa21.94■■□□□ 1.1
COL27A1-205ENST00000485397 POTEB3A0JP26 581 aa21.93■■□□□ 1.1
COL27A1-205ENST00000485397 GRM6O15303 877 aa21.93■■□□□ 1.1
COL27A1-205ENST00000485397 CDC45O75419 566 aa21.93■■□□□ 1.1
COL27A1-205ENST00000485397 ATG7O95352 703 aa21.93■■□□□ 1.1
COL27A1-205ENST00000485397 CCNE2O96020 404 aa21.93■■□□□ 1.1
COL27A1-205ENST00000485397 ADD1P35611 737 aaKnown RBP21.93■■□□□ 1.1
COL27A1-205ENST00000485397 AP3B2Q13367 1082 aa21.93■■□□□ 1.1
COL27A1-205ENST00000485397 BTG3Q14201 252 aaPredicted RBP21.93■■□□□ 1.1
COL27A1-205ENST00000485397 KRT32Q14532 448 aa21.93■■□□□ 1.1
COL27A1-205ENST00000485397 POTEBQ6S5H4 581 aa21.93■■□□□ 1.1
COL27A1-205ENST00000485397 TEX2Q8IWB9 1127 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms