RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 USP17L21D6R901 530 aa11.15□□□□□ -0.62
APTX-226ENST00000483148 FGAP02671 866 aa11.15□□□□□ -0.62
APTX-226ENST00000483148 LSP1P33241 339 aa11.15□□□□□ -0.62
APTX-226ENST00000483148 PTGISQ16647 500 aa11.15□□□□□ -0.62
APTX-226ENST00000483148 RNF187Q5TA31 235 aaPredicted RBP11.15□□□□□ -0.62
APTX-226ENST00000483148 FAM109BQ6ICB4 259 aaPredicted RBP11.15□□□□□ -0.62
APTX-226ENST00000483148 PPP4R3AQ6IN85 833 aa11.15□□□□□ -0.62
APTX-226ENST00000483148 CCDC121Q6ZUS5 278 aa11.15□□□□□ -0.62
APTX-226ENST00000483148 CCDC114Q96M63 670 aa11.15□□□□□ -0.62
APTX-226ENST00000483148 ASCC2Q9H1I8 757 aaPredicted RBP11.15□□□□□ -0.62
APTX-226ENST00000483148 EHD4Q9H223 541 aa11.15□□□□□ -0.62
APTX-226ENST00000483148 HOMER3Q9NSC5 361 aa11.15□□□□□ -0.62
APTX-226ENST00000483148 SPATS2LQ9NUQ6 558 aaKnown RBP11.15□□□□□ -0.62
APTX-226ENST00000483148 ARPP21Q9UBL0 812 aaPredicted RBP11.15□□□□□ -0.62
APTX-226ENST00000483148 DDX20Q9UHI6 824 aaKnown RBP11.15□□□□□ -0.62
APTX-226ENST00000483148 SAP30BPQ9UHR5 308 aaKnown RBP11.15□□□□□ -0.62
APTX-226ENST00000483148 KLF18A0A0U1RQI7 1052 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 GOLGA8BA8MQT2 603 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 KRT86O43790 486 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 PPP1R37O75864 691 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 NDUFA10O95299 355 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 FAM107AO95990 144 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 PRLRP16471 622 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 GCLCP48506 637 aaPredicted RBP11.14□□□□□ -0.63
APTX-226ENST00000483148 ADCY2Q08462 1091 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 BIRC2Q13490 618 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 HSP90AA4PQ58FG1 418 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 TTMPQ5BVD1 217 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 C12orf60Q5U649 245 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 LHX8Q68G74 356 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 TRMT44Q8IYL2 757 aaKnown RBP11.14□□□□□ -0.63
APTX-226ENST00000483148 ARFGAP2Q8N6H7 521 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
APTX-226ENST00000483148 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 MED15Q96RN5 788 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 NAPBQ9H115 298 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 PI4KBQ9UBF8 816 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 GUCA1BQ9UMX6 200 aa11.14□□□□□ -0.63
APTX-226ENST00000483148 PES1O00541 588 aaKnown RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 TBC1D12O60347 775 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 ATP1A1P05023 1023 aaKnown RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 MYBL2P10244 700 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 CYP2D6P10635 497 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 PTPREP23469 700 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 HMGCS2P54868 508 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 EVX2Q03828 476 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 GABPAQ06546 454 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 CACNB2Q08289 660 aaPredicted RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 PDCLQ13371 301 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 CUL4BQ13620 913 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 TRIM29Q14134 588 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 GLE1Q53GS7 698 aaKnown RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 LACTB2Q53H82 288 aaPredicted RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 AP1ARQ63HQ0 302 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 NAIF1Q69YI7 327 aaPredicted RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 KRT40Q6A162 431 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 CYB5D1Q6P9G0 228 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 NLRP14Q86W24 1093 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 SLF1Q9BQI6 1058 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 SERTAD1Q9UHV2 236 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 ROBO3Q96MS0 1386 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 DOCK1Q14185 1865 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 CYP2D7A0A087X1C5 515 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 HMGB1P1B2RPK0 211 aaPredicted RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 SMIM22K7EJ46 135 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 HLA-DOAP06340 250 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 GHRP10912 638 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 CCND3P30281 292 aaPredicted RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 TBC1D8BQ0IIM8 1120 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 TSR1Q2NL82 804 aaKnown RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 FUKQ8N0W3 1084 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 MYCBPAPQ8TBZ2 947 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 CCHCR1Q8TD31 782 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 TCP11Q8WWU5 503 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 CCT8L2Q96SF2 557 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 NUP88Q99567 741 aaPredicted RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 P2RX7Q99572 595 aaKnown RBP11.13□□□□□ -0.63
APTX-226ENST00000483148 TSGA10Q9BZW7 698 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 DNAJC18Q9H819 358 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 TXNRD2Q9NNW7 524 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 MORF4L1Q9UBU8 362 aa11.13□□□□□ -0.63
APTX-226ENST00000483148 UNC80Q8N2C7 3258 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 PRC1O43663 620 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
APTX-226ENST00000483148 CYLC1P35663 651 aaPredicted RBP11.12□□□□□ -0.63
APTX-226ENST00000483148 MDH1P40925 334 aaKnown RBP11.12□□□□□ -0.63
APTX-226ENST00000483148 PPARAQ07869 468 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 XRCC4Q13426 336 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 CCL14Q16627 93 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 IMMTQ16891 758 aaKnown RBP11.12□□□□□ -0.63
APTX-226ENST00000483148 Q3C1V9 767 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 CCDC122Q5T0U0 273 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 MREGQ8N565 214 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 ZNF280CQ8ND82 737 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 OR8K1Q8NGG5 319 aa11.12□□□□□ -0.63
APTX-226ENST00000483148 CENPHQ9H3R5 247 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms