RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 RAET1EQ8TD07 263 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 EDEM1Q92611 657 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 KCNB2Q92953 911 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 IL17RAQ96F46 866 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 MOV10L1Q9BXT6 1211 aaKnown RBP5.74□□□□□ -1.49
PTCD3-213ENST00000480102 TXNRD2Q9NNW7 524 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 PPP4R2Q9NY27 417 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 ABI2Q9NYB9 513 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-213ENST00000480102 PTCH2Q9Y6C5 1203 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 IVNS1ABPQ9Y6Y0 642 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 DOCK1Q14185 1865 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 CENPFP49454 3210 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 SIPA1L1O43166 1804 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 SYNGAP1Q96PV0 1343 aa5.74□□□□□ -1.49
PTCD3-213ENST00000480102 POLR2AP24928 1970 aaKnown RBP5.73□□□□□ -1.49
PTCD3-213ENST00000480102 J3QW42 95 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 ZBED4O75132 1171 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 PDGFAP04085 211 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 RPLP1P05386 114 aaKnown RBP5.73□□□□□ -1.49
PTCD3-213ENST00000480102 CYP21A2P08686 494 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 PDHBP11177 359 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 FCER1AP12319 257 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 MZF1P28698 734 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-213ENST00000480102 STAT3P40763 770 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 LIFRP42702 1097 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 SLC1A4P43007 532 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 RAC1P63000 192 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 DNM1Q05193 864 aaKnown RBP5.73□□□□□ -1.49
PTCD3-213ENST00000480102 ZNF543Q08ER8 600 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 KRT32Q14532 448 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 TMEM132BQ14DG7 1078 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 SART3Q15020 963 aaKnown RBP5.73□□□□□ -1.49
PTCD3-213ENST00000480102 NECTIN1Q15223 517 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 KIAA1755Q5JYT7 1200 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 ALKBH2Q6NS38 261 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 KIAA1211Q6ZU35 1233 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 ZNF438Q7Z4V0 828 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 SGMS1Q86VZ5 419 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 DMRTC2Q8IXT2 367 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-213ENST00000480102 PLD4Q96BZ4 506 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 CCDC136Q96JN2 1154 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 NACC1Q96RE7 527 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 SEZ6LQ9BYH1 1024 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 ARHGAP39Q9C0H5 1083 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 RBSNQ9H1K0 784 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 PORCNQ9H237 461 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 RANBP17Q9H2T7 1088 aaKnown RBP5.73□□□□□ -1.49
PTCD3-213ENST00000480102 TMEM63CQ9P1W3 806 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 BTBD7Q9P203 1132 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-213ENST00000480102 CLIP2Q9UDT6 1046 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 STX8Q9UNK0 236 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 GNEQ9Y223 722 aaKnown RBP5.73□□□□□ -1.49
PTCD3-213ENST00000480102 PFASO15067 1338 aa5.73□□□□□ -1.49
PTCD3-213ENST00000480102 SMIM22K7EJ46 135 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ADCY3O60266 1144 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 RANBP6O60518 1105 aaKnown RBP5.72□□□□□ -1.49
PTCD3-213ENST00000480102 CDC45O75419 566 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 PRDM1O75626 825 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 FAM13AO94988 1023 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 SGPL1O95470 568 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ABL1P00519 1130 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ICAM1P05362 532 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ELNP15502 786 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 PCSK2P16519 638 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ERCC3P19447 782 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 TROAPQ12815 778 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 SEC23AQ15436 765 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 GRIK4Q16099 956 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ZNF792Q3KQV3 632 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ASPRV1Q53RT3 343 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 TTC39BQ5VTQ0 682 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-213ENST00000480102 MFSD14CQ5VZR4 134 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 SLFN13Q68D06 897 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 XKR5Q6UX68 686 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 CCDC129Q6ZRS4 1044 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 WFDC8Q8IUA0 241 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 TBC1D10CQ8IV04 446 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 CCAR1Q8IX12 1150 aaKnown RBP5.72□□□□□ -1.49
PTCD3-213ENST00000480102 FMR1NBQ8N0W7 255 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-213ENST00000480102 FAM177A1Q8N128 213 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-213ENST00000480102 DTWD1Q8N5C7 304 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 NCOA7Q8NI08 942 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 MORC4Q8TE76 937 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ATG4CQ96DT6 458 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 MTMR8Q96EF0 704 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 TMEM87BQ96K49 555 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 TMEM47Q9BQJ4 181 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 LZTS2Q9BRK4 669 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 LSG1Q9H089 658 aaKnown RBP5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ZSWIM5Q9P217 1185 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 OGDHLQ9ULD0 1010 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 TACC3Q9Y6A5 838 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 MKI67P46013 3256 aaKnown RBP5.72□□□□□ -1.49
PTCD3-213ENST00000480102 GREB1LQ9C091 1923 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-213ENST00000480102 ZNF536O15090 1300 aa5.72□□□□□ -1.49
PTCD3-213ENST00000480102 DDAH1O94760 285 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 REC8O95072 547 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 KIF4AO95239 1232 aa5.71□□□□□ -1.5
PTCD3-213ENST00000480102 CALM1P0DP23 149 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms