RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 LINC01553A4QN01 128 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 ARP10275 920 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 PSMA5P28066 241 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 ZNF76P36508 570 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 KRT40Q6A162 431 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 RPAINQ86UA6 219 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 IL27Q8NEV9 243 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 GDPD5Q8WTR4 605 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 CCDC12Q8WUD4 166 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-218ENST00000479554 APBB2Q92870 758 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 ASB2Q96Q27 587 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 TGS1Q96RS0 853 aaKnown RBP16.34■□□□□ 0.21
ATG4B-218ENST00000479554 IFIH1Q9BYX4 1025 aaKnown RBP16.34■□□□□ 0.21
ATG4B-218ENST00000479554 OSBPL7Q9BZF2 842 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 AGO4Q9HCK5 861 aaKnown RBP16.34■□□□□ 0.21
ATG4B-218ENST00000479554 MTUS1Q9ULD2 1270 aa16.34■□□□□ 0.21
ATG4B-218ENST00000479554 KAT6AQ92794 2004 aa16.33■□□□□ 0.21
ATG4B-218ENST00000479554 ESYT2A0FGR8 921 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 MBLAC1A4D2B0 266 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-218ENST00000479554 ACTR2P61160 394 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 ERVK-21P61565 698 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 IGBP1P78318 339 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
ATG4B-218ENST00000479554 ITGB3BPQ13352 177 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-218ENST00000479554 JAKMIP3Q5VZ66 844 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 FBXL16Q8N461 479 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 TNPO1Q92973 898 aaKnown RBP16.33■□□□□ 0.2
ATG4B-218ENST00000479554 PCYT2Q99447 389 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 AGXT2Q9BYV1 514 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 C6orf50Q9HD87 102 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 TRPC6Q9Y210 931 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 SIP14410 1827 aa16.33■□□□□ 0.2
ATG4B-218ENST00000479554 RRN3P2A6NIE6 340 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 MEIS1O00470 390 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 LPXNO60711 386 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 CHRNA1P02708 482 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 RPLP2P05387 115 aaKnown RBP16.32■□□□□ 0.2
ATG4B-218ENST00000479554 GHRP10912 638 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 HTRA4P83105 476 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-218ENST00000479554 MGAT3Q09327 533 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 MARCH8Q5T0T0 291 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 MCTP2Q6DN12 878 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 NIPA1Q7RTP0 329 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 REXO1Q8N1G1 1221 aaKnown RBP16.32■□□□□ 0.2
ATG4B-218ENST00000479554 DNAJB3Q8WWF6 145 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 YME1L1Q96TA2 773 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
ATG4B-218ENST00000479554 TTC28Q96AY4 2481 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-218ENST00000479554 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
ATG4B-218ENST00000479554 UPP2O95045 317 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 INSRRP14616 1297 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 STAT5BP51692 787 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 C8orf34Q49A92 452 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 PLPPR4Q7Z2D5 763 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 PLA2G4DQ86XP0 818 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 PHKBQ93100 1093 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 TOP1MTQ969P6 601 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-218ENST00000479554 LMCD1Q9NZU5 365 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 CDY2AQ9Y6F7 541 aa16.31■□□□□ 0.2
ATG4B-218ENST00000479554 PRRC2BQ5JSZ5 2229 aaKnown RBP16.31■□□□□ 0.2
ATG4B-218ENST00000479554 COL4A6Q14031 1691 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 FAM86B1E9PN63 330 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 DDX39AO00148 427 aaKnown RBP16.3■□□□□ 0.2
ATG4B-218ENST00000479554 EPB41L2O43491 1005 aaKnown RBP16.3■□□□□ 0.2
ATG4B-218ENST00000479554 FAM86B2P0C5J1 330 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 GNA11P29992 359 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 LPIN1Q14693 890 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 PLCB4Q15147 1175 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 PKN1Q16512 942 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 AAK1Q2M2I8 961 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 FBXO22Q8NEZ5 403 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 CCDC148Q8NFR7 591 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 SP7Q8TDD2 431 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-218ENST00000479554 ADAMTS19Q8TE59 1207 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 ZBTB10Q96DT7 871 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 C17orf80Q9BSJ5 609 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 RNF26Q9BY78 433 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-218ENST00000479554 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
ATG4B-218ENST00000479554 POTEB3A0JP26 581 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 M0QZ92 97 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 BACH1O14867 736 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 ATG7O95352 703 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 CCNE2O96020 404 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 CYP3A4P08684 503 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 SLC26A2P50443 739 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
ATG4B-218ENST00000479554 MRPS6P82932 125 aaKnown RBP16.29■□□□□ 0.2
ATG4B-218ENST00000479554 SETQ01105 290 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-218ENST00000479554 TFF2Q03403 129 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 FBXO47Q5MNV8 452 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 FAM160B1Q5W0V3 765 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 POTEBQ6S5H4 581 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 TSHZ1Q6ZSZ6 1077 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 RUFY3Q7L099 469 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 BICD2Q8TD16 824 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 TRAPPC12Q8WVT3 735 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms