RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 RASGRP4Q8TDF6 673 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 HERVK_113Q902F9 699 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 ZNF577Q9BSK1 485 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 TM6SF1Q9BZW5 370 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 NKX2-4Q9H2Z4 354 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 SMARCAD1Q9H4L7 1026 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 BCAS3Q9H6U6 928 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 SLC28A3Q9HAS3 691 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
CMTM1-208ENST00000479381 SETD4Q9NVD3 440 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 ERAP1Q9NZ08 941 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 UBIAD1Q9Y5Z9 338 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 DNAH12Q6ZR08 3092 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 M0QZ92 97 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 TREHO43280 583 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 ATP9AO75110 1047 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 PARNO95453 639 aaKnown RBP10.32□□□□□ -0.76
CMTM1-208ENST00000479381 CKBP12277 381 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 KCNA2P16389 499 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-208ENST00000479381 SREBF1P36956 1147 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 RABGGTBP53611 331 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 SETQ01105 290 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-208ENST00000479381 PRR16Q569H4 304 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 FAM160B1Q5W0V3 765 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 FAM117BQ6P1L5 589 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 MICALL1Q8N3F8 863 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 SLC17A8Q8NDX2 589 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 PPM1EQ8WY54 764 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 MYLIPQ8WY64 445 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 ZNF274Q96GC6 653 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-208ENST00000479381 C16orf70Q9BSU1 422 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 PBX4Q9BYU1 374 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 BRMS1Q9HCU9 246 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 KCNH7Q9NS40 1196 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 MTMR10Q9NXD2 777 aa10.32□□□□□ -0.76
CMTM1-208ENST00000479381 CXXC1Q9P0U4 656 aaPredicted RBP10.32□□□□□ -0.76
CMTM1-208ENST00000479381 ESYT2A0FGR8 921 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 RSPH10B2B2RC85 870 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 HAS3O00219 553 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 RSPH10BP0C881 870 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 ARP10275 920 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 IGFBP4P22692 258 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 PBX2P40425 430 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 AK2P54819 239 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 ANAPC15P60006 121 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 FUT2Q10981 343 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 TRIM29Q14134 588 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 ZNF618Q5T7W0 954 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 FAM109BQ6ICB4 259 aaPredicted RBP10.31□□□□□ -0.76
CMTM1-208ENST00000479381 MIS18BP1Q6P0N0 1132 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 CNKSR3Q6P9H4 555 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 C16orf59Q7L2K0 433 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 TEX2Q8IWB9 1127 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 CYP2W1Q8TAV3 490 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 OXER1Q8TDS5 423 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 WASF1Q92558 559 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 SLC9A7Q96T83 725 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 C22orf23Q9BZE7 217 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 ZMYND12Q9H0C1 365 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 FAM49AQ9H0Q0 323 aaPredicted RBP10.31□□□□□ -0.76
CMTM1-208ENST00000479381 SEMA6BQ9H3T3 888 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 RNPEPQ9H4A4 650 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 ZNF576Q9H609 170 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 UPF2Q9HAU5 1272 aaKnown RBP10.31□□□□□ -0.76
CMTM1-208ENST00000479381 AGO4Q9HCK5 861 aaKnown RBP10.31□□□□□ -0.76
CMTM1-208ENST00000479381 LHX6Q9UPM6 363 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 STXBP5LQ9Y2K9 1186 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 EMSYQ7Z589 1322 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 NRCAMQ92823 1304 aa10.31□□□□□ -0.76
CMTM1-208ENST00000479381 NID2Q14112 1375 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 TMEM265A0A087WTH1 108 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 CCDC194A0A1B0GVG4 234 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 CHMP2AO43633 222 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 TLL1O43897 1013 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 BAIAP3O94812 1187 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 STAT5BP51692 787 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 NEK4P51957 841 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 ACTR2P61160 394 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 IKBKEQ14164 716 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 GRIK4Q16099 956 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 PKN1Q16512 942 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 PDXDC2PQ6P474 469 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 MYOCDQ8IZQ8 938 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 FBXL16Q8N461 479 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 LMBR1Q8WVP7 490 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 SEPT8Q92599 483 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 DHX38Q92620 1227 aaKnown RBP10.3□□□□□ -0.76
CMTM1-208ENST00000479381 CDX2Q99626 313 aaPredicted RBP10.3□□□□□ -0.76
CMTM1-208ENST00000479381 AGXT2Q9BYV1 514 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 ZNF302Q9NR11 478 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 TUBE1Q9UJT0 475 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 GINS2Q9Y248 185 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 NFASCO94856 1347 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 GBF1Q92538 1859 aa10.3□□□□□ -0.76
CMTM1-208ENST00000479381 GSTTP1A0A1W2PQM5 241 aa10.29□□□□□ -0.76
CMTM1-208ENST00000479381 IPO5O00410 1097 aaKnown RBP10.29□□□□□ -0.76
CMTM1-208ENST00000479381 EFCAB14O75071 495 aa10.29□□□□□ -0.76
CMTM1-208ENST00000479381 LGR5O75473 907 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms