RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 SLC9A2Q9UBY0 812 aa25.07■■□□□ 1.6
MCF2L2-210ENST00000478652 TUBE1Q9UJT0 475 aa25.07■■□□□ 1.6
MCF2L2-210ENST00000478652 NAP1L2Q9ULW6 460 aaPredicted RBP25.07■■□□□ 1.6
MCF2L2-210ENST00000478652 XIRP2A4UGR9 3374 aa25.07■■□□□ 1.6
MCF2L2-210ENST00000478652 MAFGO15525 162 aa25.06■■□□□ 1.6
MCF2L2-210ENST00000478652 UPP2O95045 317 aa25.06■■□□□ 1.6
MCF2L2-210ENST00000478652 GHRP10912 638 aa25.06■■□□□ 1.6
MCF2L2-210ENST00000478652 BMP1P13497 986 aa25.06■■□□□ 1.6
MCF2L2-210ENST00000478652 ITGB3BPQ13352 177 aaPredicted RBP25.06■■□□□ 1.6
MCF2L2-210ENST00000478652 UHRF1Q96T88 793 aaPredicted RBP25.06■■□□□ 1.6
MCF2L2-210ENST00000478652 IFIH1Q9BYX4 1025 aaKnown RBP25.06■■□□□ 1.6
MCF2L2-210ENST00000478652 SMARCAD1Q9H4L7 1026 aa25.06■■□□□ 1.6
MCF2L2-210ENST00000478652 SNX14Q9Y5W7 946 aa25.06■■□□□ 1.6
MCF2L2-210ENST00000478652 MBLAC1A4D2B0 266 aaPredicted RBP25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 hCG_1984214I3L0E3 225 aa25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 IGBP1P78318 339 aa25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 TAF2Q6P1X5 1199 aa25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 Q6ZUG5 572 aa25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 RPAINQ86UA6 219 aa25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 ZNF713Q8N859 430 aaPredicted RBP25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 DNAJB3Q8WWF6 145 aa25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 TOP1MTQ969P6 601 aa25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 JAKMIP1Q96N16 626 aaKnown RBP25.05■■□□□ 1.6
MCF2L2-210ENST00000478652 INSRRP14616 1297 aa25.04■■□□□ 1.6
MCF2L2-210ENST00000478652 HSPA4P34932 840 aa25.04■■□□□ 1.6
MCF2L2-210ENST00000478652 SREBF1P36956 1147 aa25.04■■□□□ 1.6
MCF2L2-210ENST00000478652 RCAN1P53805 252 aa25.04■■□□□ 1.6
MCF2L2-210ENST00000478652 ACTR2P61160 394 aa25.04■■□□□ 1.6
MCF2L2-210ENST00000478652 CEP55Q53EZ4 464 aa25.04■■□□□ 1.6
MCF2L2-210ENST00000478652 BRF1Q92994 677 aa25.04■■□□□ 1.6
MCF2L2-210ENST00000478652 AGO4Q9HCK5 861 aaKnown RBP25.04■■□□□ 1.6
MCF2L2-210ENST00000478652 NFASCO94856 1347 aa25.04■■□□□ 1.6
MCF2L2-210ENST00000478652 FOSP01100 380 aaPredicted RBP25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 HMGB1P09429 215 aaKnown RBP25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 METAP2P50579 478 aaKnown RBP eCLIP25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 AP3B2Q13367 1082 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 LPIN1Q14693 890 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 JAKMIP3Q5VZ66 844 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 IL27Q8NEV9 243 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 FBXO22Q8NEZ5 403 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 TRAPPC12Q8WVT3 735 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 APBB2Q92870 758 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 SDF4Q9BRK5 362 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 CDY2AQ9Y6F7 541 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 BDP1A6H8Y1 2624 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 NID2Q14112 1375 aa25.03■■□□□ 1.6
MCF2L2-210ENST00000478652 MEIS1O00470 390 aa25.02■■□□□ 1.6
MCF2L2-210ENST00000478652 FGD1P98174 961 aa25.02■■□□□ 1.6
MCF2L2-210ENST00000478652 PLCB4Q15147 1175 aa25.02■■□□□ 1.6
MCF2L2-210ENST00000478652 PFKFB3Q16875 520 aaPredicted RBP25.02■■□□□ 1.6
MCF2L2-210ENST00000478652 YME1L1Q96TA2 773 aa25.02■■□□□ 1.6
MCF2L2-210ENST00000478652 LMCD1Q9NZU5 365 aa25.02■■□□□ 1.6
MCF2L2-210ENST00000478652 FAM86B1E9PN63 330 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 DDX39AO00148 427 aaKnown RBP25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 CCNE2O96020 404 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 FAM86B2P0C5J1 330 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 SCG2P13521 617 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 PKN1Q16512 942 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 BLOC1S2Q6QNY1 142 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 TEX2Q8IWB9 1127 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 CRYGNQ8WXF5 182 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 CCDC136Q96JN2 1154 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 UIMC1Q96RL1 719 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 FAM49AQ9H0Q0 323 aaPredicted RBP25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 COG5Q9UP83 839 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 TRPC6Q9Y210 931 aa25.01■■□□□ 1.59
MCF2L2-210ENST00000478652 PPFIA3O75145 1194 aa25■■□□□ 1.59
MCF2L2-210ENST00000478652 MRPS6P82932 125 aaKnown RBP25■■□□□ 1.59
MCF2L2-210ENST00000478652 AAK1Q2M2I8 961 aa25■■□□□ 1.59
MCF2L2-210ENST00000478652 EPC2Q52LR7 807 aa25■■□□□ 1.59
MCF2L2-210ENST00000478652 FBXO47Q5MNV8 452 aa25■■□□□ 1.59
MCF2L2-210ENST00000478652 HLA-CQ95604 372 aa25■■□□□ 1.59
MCF2L2-210ENST00000478652 AZI2Q9H6S1 392 aa25■■□□□ 1.59
MCF2L2-210ENST00000478652 IGLV3-22A0A075B6J6 115 aa24.99■■□□□ 1.59
MCF2L2-210ENST00000478652 RPS6KB1P23443 525 aa24.99■■□□□ 1.59
MCF2L2-210ENST00000478652 RSPH3Q86UC2 560 aa24.99■■□□□ 1.59
MCF2L2-210ENST00000478652 PHKBQ93100 1093 aa24.99■■□□□ 1.59
MCF2L2-210ENST00000478652 AGXT2Q9BYV1 514 aa24.99■■□□□ 1.59
MCF2L2-210ENST00000478652 AGO3Q9H9G7 860 aaKnown RBP24.99■■□□□ 1.59
MCF2L2-210ENST00000478652 ESYT2A0FGR8 921 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 RRN3P2A6NIE6 340 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 ATG7O95352 703 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 ZNF76P36508 570 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 STAT5BP51692 787 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 TMEM62Q0P6H9 643 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 PLPPR4Q7Z2D5 763 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 PLA2G4DQ86XP0 818 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 LINC01599Q8WXQ3 324 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 ZMYND12Q9H0C1 365 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 GLT8D2Q9H1C3 349 aa24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 FNDC1Q4ZHG4 1894 aaPredicted RBP24.98■■□□□ 1.59
MCF2L2-210ENST00000478652 IGKV6D-21A0A0A0MT36 114 aa24.97■■□□□ 1.59
MCF2L2-210ENST00000478652 CCDC196A0A1B0GTZ2 297 aa24.97■■□□□ 1.59
MCF2L2-210ENST00000478652 DHX15O43143 795 aaKnown RBP24.97■■□□□ 1.59
MCF2L2-210ENST00000478652 NTRK3Q16288 839 aa24.97■■□□□ 1.59
MCF2L2-210ENST00000478652 TSHZ1Q6ZSZ6 1077 aa24.97■■□□□ 1.59
MCF2L2-210ENST00000478652 NIPA1Q7RTP0 329 aa24.97■■□□□ 1.59
MCF2L2-210ENST00000478652 CCDC60Q8IWA6 550 aaPredicted RBP24.97■■□□□ 1.59
MCF2L2-210ENST00000478652 RASGRP4Q8TDF6 673 aa24.97■■□□□ 1.59
MCF2L2-210ENST00000478652 ENPP3O14638 875 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms