RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 EIF4A3P38919 411 aaKnown RBP17.62■□□□□ 0.41
VARS2-207ENST00000476162 VAV2P52735 878 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 MARSP56192 900 aaKnown RBP17.62■□□□□ 0.41
VARS2-207ENST00000476162 FKBP1CQ5VVH2 108 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 CACNA2D4Q7Z3S7 1137 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 TRIM59Q8IWR1 403 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 GOLGA5Q8TBA6 731 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 POLR3CQ9BUI4 534 aaPredicted RBP17.62■□□□□ 0.41
VARS2-207ENST00000476162 POLD4Q9HCU8 107 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 FBXO28Q9NVF7 368 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 RRP15Q9Y3B9 282 aaKnown RBP17.62■□□□□ 0.41
VARS2-207ENST00000476162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.62■□□□□ 0.41
VARS2-207ENST00000476162 RSPH10B2B2RC85 870 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 ATP1A1P05023 1023 aaKnown RBP17.62■□□□□ 0.41
VARS2-207ENST00000476162 RSPH10BP0C881 870 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 KIF11P52732 1056 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 KIF5AQ12840 1032 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 CC2D1AQ6P1N0 951 aaPredicted RBP17.62■□□□□ 0.41
VARS2-207ENST00000476162 OTOP1Q7RTM1 612 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 TRAPPC11Q7Z392 1133 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 NIM1KQ8IY84 436 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 EHBP1Q8NDI1 1231 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 RUSC1Q9BVN2 902 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 ANKZF1Q9H8Y5 726 aa17.62■□□□□ 0.41
VARS2-207ENST00000476162 CTAGE15A4D2H0 777 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 CTAGE8P0CG41 777 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 EDRF1Q3B7T1 1238 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 NBPF9Q3BBW0 867 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 PDXDC1Q6P996 788 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 CTAGE6Q86UF2 777 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 FAM83AQ86UY5 434 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 CTAGE4Q8IX94 777 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 ZC3H3Q8IXZ2 948 aaKnown RBP17.61■□□□□ 0.41
VARS2-207ENST00000476162 MTMR14Q8NCE2 650 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 AGBL3Q8NEM8 1001 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 CRACR2AQ9BSW2 395 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 DEF6Q9H4E7 631 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 BCAS3Q9H6U6 928 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 ZCCHC17Q9NP64 241 aaKnown RBP17.61■□□□□ 0.41
VARS2-207ENST00000476162 NLRC4Q9NPP4 1024 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 SCAF8Q9UPN6 1271 aaKnown RBP17.61■□□□□ 0.41
VARS2-207ENST00000476162 RABGAP1Q9Y3P9 1069 aa17.61■□□□□ 0.41
VARS2-207ENST00000476162 MACROD2A1Z1Q3 448 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 CETN3O15182 167 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 CHMP2AO43633 222 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 EYA4O95677 639 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 MYBP10242 640 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 NR2F2P24468 414 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 HOXD13P35453 343 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 CTTNQ14247 550 aaKnown RBP17.6■□□□□ 0.41
VARS2-207ENST00000476162 LRCH2Q5VUJ6 765 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 PIGOQ8TEQ8 1089 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 PURBQ96QR8 312 aaKnown RBP17.6■□□□□ 0.41
VARS2-207ENST00000476162 HSD17B14Q9BPX1 270 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 IFIH1Q9BYX4 1025 aaKnown RBP17.6■□□□□ 0.41
VARS2-207ENST00000476162 EDEM3Q9BZQ6 932 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 MRPL11Q9Y3B7 192 aaKnown RBP17.6■□□□□ 0.41
VARS2-207ENST00000476162 PCDHA13Q9Y5I0 950 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 WNT10BO00744 389 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 PSMD10O75832 226 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 NOL4O94818 638 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 PRPF6O94906 941 aaKnown RBP17.6■□□□□ 0.41
VARS2-207ENST00000476162 CXCL9Q07325 125 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 KNOP1Q1ED39 458 aaKnown RBP17.6■□□□□ 0.41
VARS2-207ENST00000476162 EPM2AIP1Q7L775 607 aaPredicted RBP17.6■□□□□ 0.41
VARS2-207ENST00000476162 FAM160B2Q86V87 743 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 GOLGA6L1Q8N7Z2 621 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 SH2D4AQ9H788 454 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 PSD3Q9NYI0 1048 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 PGAP2Q9UHJ9 254 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 JRKLQ9Y4A0 524 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 SAR1BQ9Y6B6 198 aa17.6■□□□□ 0.41
VARS2-207ENST00000476162 AKR1B10O60218 316 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 PLA2G6O60733 806 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 SRGAP2O75044 1071 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 SLITRK3O94933 977 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 OAS2P29728 719 aaKnown RBP17.59■□□□□ 0.41
VARS2-207ENST00000476162 APBA1Q02410 837 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 PAPD7Q5XG87 772 aaKnown RBP17.59■□□□□ 0.41
VARS2-207ENST00000476162 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 LDHDQ86WU2 507 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 TPH2Q8IWU9 490 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 LSM14BQ9BX40 385 aaKnown RBP17.59■□□□□ 0.41
VARS2-207ENST00000476162 TSGA10Q9BZW7 698 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 ARFGAP3Q9NP61 516 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 CEP72Q9P209 647 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 FEM1BQ9UK73 627 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 TRAF3IP3Q9Y228 551 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 LCA5LO95447 670 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 TUBB4BP68371 445 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 CEP55Q53EZ4 464 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 RINT1Q6NUQ1 792 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 SLC5A5Q92911 643 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 DYDC2Q96IM9 177 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 VPS33BQ9H267 617 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 FAM184BQ9ULE4 1060 aa17.59■□□□□ 0.41
VARS2-207ENST00000476162 SHTN1A0MZ66 631 aa17.58■□□□□ 0.4
VARS2-207ENST00000476162 SFI1A8K8P3 1242 aa17.58■□□□□ 0.4
VARS2-207ENST00000476162 USO1O60763 962 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms