RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 IGDCC4Q8TDY8 1250 aa7□□□□□ -1.29
LTN1-204ENST00000475344 MKL1Q969V6 931 aa7□□□□□ -1.29
LTN1-204ENST00000475344 MBD6Q96DN6 1003 aa7□□□□□ -1.29
LTN1-204ENST00000475344 OSBPL2Q9H1P3 480 aa7□□□□□ -1.29
LTN1-204ENST00000475344 SFMBT1Q9UHJ3 866 aa7□□□□□ -1.29
LTN1-204ENST00000475344 WNT9AO14904 365 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 EFCAB14O75071 495 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 IL18BPO95998 194 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 COL6A1P12109 1028 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 DBPQ10586 325 aaPredicted RBP6.99□□□□□ -1.29
LTN1-204ENST00000475344 BMS1Q14692 1282 aaKnown RBP6.99□□□□□ -1.29
LTN1-204ENST00000475344 SURF1Q15526 300 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 ARHGEF18Q6ZSZ5 1173 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 GPR155Q7Z3F1 870 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 SLC7A14Q8TBB6 771 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 THAP3Q8WTV1 239 aaPredicted RBP6.99□□□□□ -1.29
LTN1-204ENST00000475344 SREK1Q8WXA9 508 aaKnown RBP6.99□□□□□ -1.29
LTN1-204ENST00000475344 MAGEB10Q96LZ2 347 aaPredicted RBP6.99□□□□□ -1.29
LTN1-204ENST00000475344 SMPD4Q9NXE4 827 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 PTCH2Q9Y6C5 1203 aa6.99□□□□□ -1.29
LTN1-204ENST00000475344 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.98□□□□□ -1.29
LTN1-204ENST00000475344 NPEPPSL1A6NEC2 478 aa6.98□□□□□ -1.29
LTN1-204ENST00000475344 H0Y858 1186 aa6.98□□□□□ -1.29
LTN1-204ENST00000475344 ZNF561-AS1K7EIQ3 104 aa6.98□□□□□ -1.29
LTN1-204ENST00000475344 KLHL18O94889 574 aa6.98□□□□□ -1.29
LTN1-204ENST00000475344 NFKB2Q00653 900 aa6.98□□□□□ -1.29
LTN1-204ENST00000475344 FIGNQ5HY92 759 aa6.98□□□□□ -1.29
LTN1-204ENST00000475344 CPZQ66K79 652 aa6.98□□□□□ -1.29
LTN1-204ENST00000475344 RALYLQ86SE5 291 aaKnown RBP6.98□□□□□ -1.29
LTN1-204ENST00000475344 CHST13Q8NET6 341 aa6.98□□□□□ -1.29
LTN1-204ENST00000475344 RBM15Q96T37 977 aaKnown RBP eCLIP6.98□□□□□ -1.29
LTN1-204ENST00000475344 PDGFDQ9GZP0 370 aaPredicted RBP6.98□□□□□ -1.29
LTN1-204ENST00000475344 KCND1Q9NSA2 647 aa6.98□□□□□ -1.29
LTN1-204ENST00000475344 SCDO00767 359 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 KNG1P01042 644 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 MAGEA10P43363 369 aaPredicted RBP6.97□□□□□ -1.29
LTN1-204ENST00000475344 PPP2CBP62714 309 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 PPP2CAP67775 309 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 C2orf27AQ580R0 203 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 Q6ZUG5 572 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 BRAPQ7Z569 592 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 LILRB2Q8N423 598 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 C8orf49Q96NF6 230 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 GPR20Q99678 358 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 SMURF1Q9HCE7 757 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 ST6GALNAC2Q9UJ37 374 aa6.97□□□□□ -1.29
LTN1-204ENST00000475344 CNOT11Q9UKZ1 510 aaKnown RBP6.97□□□□□ -1.29
LTN1-204ENST00000475344 CDK11AQ9UQ88 783 aaPredicted RBP6.97□□□□□ -1.29
LTN1-204ENST00000475344 GJA4P35212 333 aa6.96□□□□□ -1.3
LTN1-204ENST00000475344 PKN3Q6P5Z2 889 aa6.96□□□□□ -1.3
LTN1-204ENST00000475344 GSTCDQ8NEC7 633 aa6.96□□□□□ -1.3
LTN1-204ENST00000475344 PTPN18Q99952 460 aa6.96□□□□□ -1.3
LTN1-204ENST00000475344 PPP4R1LQ9P1A2 415 aa6.96□□□□□ -1.3
LTN1-204ENST00000475344 ADAM29Q9UKF5 820 aa6.96□□□□□ -1.3
LTN1-204ENST00000475344 ESYT3A0FGR9 886 aa6.95□□□□□ -1.3
LTN1-204ENST00000475344 C4BPAP04003 597 aaKnown RBP6.95□□□□□ -1.3
LTN1-204ENST00000475344 CHGBP05060 677 aa6.95□□□□□ -1.3
LTN1-204ENST00000475344 PTGS1P23219 599 aa6.95□□□□□ -1.3
LTN1-204ENST00000475344 MC4RP32245 332 aa6.95□□□□□ -1.3
LTN1-204ENST00000475344 KRTAP10-2P60368 255 aa6.95□□□□□ -1.3
LTN1-204ENST00000475344 FGD2Q7Z6J4 655 aa6.95□□□□□ -1.3
LTN1-204ENST00000475344 SCLYQ96I15 445 aa6.95□□□□□ -1.3
LTN1-204ENST00000475344 CCDC163A0A0D9SF12 145 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 CLASP2O75122 1294 aaKnown RBP6.94□□□□□ -1.3
LTN1-204ENST00000475344 INSRRP14616 1297 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 ADCY8P40145 1251 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 RRADP55042 308 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 LACTBP83111 547 aaPredicted RBP6.94□□□□□ -1.3
LTN1-204ENST00000475344 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 WDR72Q3MJ13 1102 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 TRIM61Q5EBN2 209 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 LCE5AQ5TCM9 118 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 DPP8Q6V1X1 898 aaPredicted RBP6.94□□□□□ -1.3
LTN1-204ENST00000475344 DBX2Q6ZNG2 339 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 GGNQ86UU5 652 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 IFNL2Q8IZJ0 200 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 MRFAP1L1Q96HT8 127 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 SAMD11Q96NU1 681 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 ZSWIM4Q9H7M6 989 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 INCENPQ9NQS7 918 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 UCKL1Q9NWZ5 548 aa6.94□□□□□ -1.3
LTN1-204ENST00000475344 ZNF888P0CJ79 500 aaPredicted RBP6.93□□□□□ -1.3
LTN1-204ENST00000475344 CSF2RBP32927 897 aa6.93□□□□□ -1.3
LTN1-204ENST00000475344 ADAM17P78536 824 aa6.93□□□□□ -1.3
LTN1-204ENST00000475344 PUM1Q14671 1186 aaKnown RBP eCLIP6.93□□□□□ -1.3
LTN1-204ENST00000475344 FSTL4Q6MZW2 842 aa6.93□□□□□ -1.3
LTN1-204ENST00000475344 CIR1Q86X95 450 aaPredicted RBP6.93□□□□□ -1.3
LTN1-204ENST00000475344 JMYQ8N9B5 988 aa6.93□□□□□ -1.3
LTN1-204ENST00000475344 IGSF22Q8N9C0 903 aa6.93□□□□□ -1.3
LTN1-204ENST00000475344 WDR48Q8TAF3 677 aa6.93□□□□□ -1.3
LTN1-204ENST00000475344 SSBP3Q9BWW4 388 aaPredicted RBP6.93□□□□□ -1.3
LTN1-204ENST00000475344 MRPL4Q9BYD3 311 aaKnown RBP6.93□□□□□ -1.3
LTN1-204ENST00000475344 CELF4Q9BZC1 486 aaKnown RBP6.93□□□□□ -1.3
LTN1-204ENST00000475344 NCOA5Q9HCD5 579 aaKnown RBP6.93□□□□□ -1.3
LTN1-204ENST00000475344 PTPN22Q9Y2R2 807 aa6.93□□□□□ -1.3
LTN1-204ENST00000475344 TCRBV16S1A1N1A0A5B0 115 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 KRT37O76014 449 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 RAPGEF3O95398 923 aa6.92□□□□□ -1.3
LTN1-204ENST00000475344 MMEP08473 750 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms