RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 HEXIM2Q96MH2 286 aaKnown RBP8.59□□□□□ -1.03
VPS50-211ENST00000474412 TEPSINQ96N21 525 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 TMEM39BQ9GZU3 492 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 PRDM5Q9NQX1 630 aaPredicted RBP8.59□□□□□ -1.03
VPS50-211ENST00000474412 GGT7Q9UJ14 662 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 TPX2Q9ULW0 747 aaKnown RBP8.59□□□□□ -1.03
VPS50-211ENST00000474412 SLC5A6Q9Y289 635 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 A0A1B0GUL7 405 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 FRAT2O75474 233 aaPredicted RBP8.58□□□□□ -1.04
VPS50-211ENST00000474412 SLITRK5O94991 958 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 EOMESO95936 686 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 OXCT1P55809 520 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 FKBP1BP68106 108 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 RASA3Q14644 834 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 CAVIN4Q5BKX8 364 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 ERMP1Q7Z2K6 904 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 GOLM1Q8NBJ4 401 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 TMEM87AQ8NBN3 555 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 PANK1Q8TE04 598 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 PARP14Q460N5 1801 aa8.58□□□□□ -1.04
VPS50-211ENST00000474412 RPAP1Q9BWH6 1393 aaPredicted RBP8.58□□□□□ -1.04
VPS50-211ENST00000474412 CILPO75339 1184 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 CST3P01034 146 aaPredicted RBP8.57□□□□□ -1.04
VPS50-211ENST00000474412 GNAI3P08754 354 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 NF2P35240 595 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 IL15P40933 162 aaPredicted RBP8.57□□□□□ -1.04
VPS50-211ENST00000474412 IRAK1P51617 712 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 RASGRF1Q13972 1273 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 ITPRIPQ8IWB1 547 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 TMEM87BQ96K49 555 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 DPH2Q9BQC3 489 aaPredicted RBP8.57□□□□□ -1.04
VPS50-211ENST00000474412 RNF186Q9NXI6 227 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 ADAM30Q9UKF2 790 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 MAPK8IP1Q9UQF2 711 aa8.57□□□□□ -1.04
VPS50-211ENST00000474412 TMEM265A0A087WTH1 108 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 FAM221AA4D161 298 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 IGF2BP3O00425 579 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS50-211ENST00000474412 MYO1BO43795 1136 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 GNAI2P04899 355 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 PLCG1P19174 1290 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 TIMM10P62072 90 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 LDLRAD1Q5T700 205 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 SLC6A19Q695T7 634 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 APOBEC3HQ6NTF7 200 aaKnown RBP8.56□□□□□ -1.04
VPS50-211ENST00000474412 LETMD1Q6P1Q0 360 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 FAM214BQ7L5A3 538 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 MRPL41Q8IXM3 137 aaKnown RBP8.56□□□□□ -1.04
VPS50-211ENST00000474412 FTSJ3Q8IY81 847 aaKnown RBP8.56□□□□□ -1.04
VPS50-211ENST00000474412 AGBL5Q8NDL9 886 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 ZNF384Q8TF68 577 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 TBC1D22AQ8WUA7 517 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 BCL7CQ8WUZ0 217 aaPredicted RBP8.56□□□□□ -1.04
VPS50-211ENST00000474412 TEKT1Q969V4 418 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 WNK4Q96J92 1243 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 HRASLS5Q96KN8 279 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 R3HDMLQ9H3Y0 253 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 TJP2Q9UDY2 1190 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 PPP2R3BQ9Y5P8 575 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 CORINQ9Y5Q5 1042 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 DOCK3Q8IZD9 2030 aa8.56□□□□□ -1.04
VPS50-211ENST00000474412 PLXNB2O15031 1838 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 FRMPD3Q5JV73 1810 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 IPO8O15397 1037 aaKnown RBP8.55□□□□□ -1.04
VPS50-211ENST00000474412 USP2O75604 605 aaPredicted RBP8.55□□□□□ -1.04
VPS50-211ENST00000474412 MMP14P50281 582 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 BNIP3Q12983 259 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 ZNF746Q6NUN9 644 aaPredicted RBP8.55□□□□□ -1.04
VPS50-211ENST00000474412 ZNF574Q6ZN55 896 aaPredicted RBP8.55□□□□□ -1.04
VPS50-211ENST00000474412 ARMC9Q7Z3E5 817 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 ABI1Q8IZP0 508 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 ABHD8Q96I13 439 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 ZDHHC15Q96MV8 337 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 PLAGL2Q9UPG8 496 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 ATRNL1Q5VV63 1379 aa8.55□□□□□ -1.04
VPS50-211ENST00000474412 MAST3O60307 1309 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 SALL1Q9NSC2 1324 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 RBM47A0AV96 593 aaKnown RBP8.54□□□□□ -1.04
VPS50-211ENST00000474412 TLR3O15455 904 aaKnown RBP8.54□□□□□ -1.04
VPS50-211ENST00000474412 TBC1D8O95759 1140 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 EIF4A3P38919 411 aaKnown RBP8.54□□□□□ -1.04
VPS50-211ENST00000474412 MCAMP43121 646 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 HDLBPQ00341 1268 aaKnown RBP8.54□□□□□ -1.04
VPS50-211ENST00000474412 PRKCQQ04759 706 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 TCP10Q12799 353 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 TNFAIP1Q13829 316 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 VGLL4Q14135 290 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 MPP2Q14168 576 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 SFRP5Q5T4F7 317 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 C20orf194Q5TEA3 1177 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 CEP85Q6P2H3 762 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 WDR66Q8TBY9 1149 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 SSH3Q8TE77 659 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 ACSF2Q96CM8 615 aaPredicted RBP8.54□□□□□ -1.04
VPS50-211ENST00000474412 NEUROD6Q96NK8 337 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 MCOLN1Q9GZU1 580 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 PAK6Q9NQU5 681 aaPredicted RBP8.54□□□□□ -1.04
VPS50-211ENST00000474412 SAGE1Q9NXZ1 904 aa8.54□□□□□ -1.04
VPS50-211ENST00000474412 VAV3Q9UKW4 847 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms