RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 FAM86B1E9PN63 330 aa23.23■■□□□ 1.31
SNX13-206ENST00000474067 NBNO60934 754 aa23.23■■□□□ 1.31
SNX13-206ENST00000474067 ATG7O95352 703 aa23.23■■□□□ 1.31
SNX13-206ENST00000474067 AMHP03971 560 aa23.23■■□□□ 1.31
SNX13-206ENST00000474067 FAM86B2P0C5J1 330 aa23.23■■□□□ 1.31
SNX13-206ENST00000474067 BLIDQ8IZY5 108 aa23.23■■□□□ 1.31
SNX13-206ENST00000474067 DAGLBQ8NCG7 672 aa23.23■■□□□ 1.31
SNX13-206ENST00000474067 MAFAQ8NHW3 353 aaPredicted RBP23.23■■□□□ 1.31
SNX13-206ENST00000474067 MYLIPQ8WY64 445 aa23.23■■□□□ 1.31
SNX13-206ENST00000474067 IGLV3-22A0A075B6J6 115 aa23.22■■□□□ 1.31
SNX13-206ENST00000474067 TLL1O43897 1013 aa23.22■■□□□ 1.31
SNX13-206ENST00000474067 HBP1O60381 514 aa23.22■■□□□ 1.31
SNX13-206ENST00000474067 PFKFB2O60825 505 aa23.22■■□□□ 1.31
SNX13-206ENST00000474067 WDR5P61964 334 aaKnown RBP23.22■■□□□ 1.31
SNX13-206ENST00000474067 ITGB3BPQ13352 177 aaPredicted RBP23.22■■□□□ 1.31
SNX13-206ENST00000474067 PRR16Q569H4 304 aa23.22■■□□□ 1.31
SNX13-206ENST00000474067 FAM26DQ5JW98 314 aa23.22■■□□□ 1.31
SNX13-206ENST00000474067 IER5Q5VY09 327 aa23.22■■□□□ 1.31
SNX13-206ENST00000474067 VWCEQ96DN2 955 aa23.22■■□□□ 1.31
SNX13-206ENST00000474067 NAP1L4Q99733 375 aaKnown RBP23.22■■□□□ 1.31
SNX13-206ENST00000474067 BRMS1Q9HCU9 246 aa23.22■■□□□ 1.31
SNX13-206ENST00000474067 POTEB3A0JP26 581 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 MBLAC1A4D2B0 266 aaPredicted RBP23.21■■□□□ 1.31
SNX13-206ENST00000474067 PSAPP07602 524 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 GRIN2CQ14957 1233 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 PLEKHG4Q58EX7 1191 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 POTEBQ6S5H4 581 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 KRT25Q7Z3Z0 450 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 USP38Q8NB14 1042 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 ZNF302Q9NR11 478 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 CEP131Q9UPN4 1083 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 COL1A2P08123 1366 aa23.21■■□□□ 1.31
SNX13-206ENST00000474067 SFNP31947 248 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 SCRN1Q12765 414 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 HIC1Q14526 733 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 NONOQ15233 471 aaKnown RBP eCLIP23.2■■□□□ 1.3
SNX13-206ENST00000474067 TRAF7Q6Q0C0 670 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 MOXD1Q6UVY6 613 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 CKAP2LQ8IYA6 745 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 NME8Q8N427 588 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 WNT8BQ93098 351 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 FAM167AQ96KS9 214 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 RIT2Q99578 217 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 SAMM50Q9Y512 469 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 PCDHA10Q9Y5I2 948 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 SQORQ9Y6N5 450 aa23.2■■□□□ 1.3
SNX13-206ENST00000474067 IGKV6D-21A0A0A0MT36 114 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 WDR64B1ANS9 1081 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 DDX39AO00148 427 aaKnown RBP23.19■■□□□ 1.3
SNX13-206ENST00000474067 CTSHP09668 335 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 INSRRP14616 1297 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 RABGGTBP53611 331 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 AK2P54819 239 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 ODR4Q5SWX8 454 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 PDXDC2PQ6P474 469 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 ABHD15Q6UXT9 468 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 IL27Q8NEV9 243 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 DBF4BQ8NFT6 615 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 TBCKQ8TEA7 893 aa23.19■■□□□ 1.3
SNX13-206ENST00000474067 YBX2Q9Y2T7 364 aaKnown RBP23.19■■□□□ 1.3
SNX13-206ENST00000474067 CCDC194A0A1B0GVG4 234 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 CA3P07451 260 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 JAK3P52333 1124 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 IGBP1P78318 339 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 GPNMBQ14956 572 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 PLCB4Q15147 1175 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 ZNF484Q5JVG2 852 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 ZNF710Q8N1W2 664 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 RDM1Q8NG50 284 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 RASGRP4Q8TDF6 673 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 ATP8B4Q8TF62 1192 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 BBXQ8WY36 941 aaPredicted RBP23.18■■□□□ 1.3
SNX13-206ENST00000474067 RAD9AQ99638 391 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 TEKT3Q9BXF9 490 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 IFIH1Q9BYX4 1025 aaKnown RBP23.18■■□□□ 1.3
SNX13-206ENST00000474067 TPCN1Q9ULQ1 816 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 PCDHA2Q9Y5H9 948 aa23.18■■□□□ 1.3
SNX13-206ENST00000474067 GAS7O60861 476 aa23.17■■□□□ 1.3
SNX13-206ENST00000474067 PPFIA3O75145 1194 aa23.17■■□□□ 1.3
SNX13-206ENST00000474067 GJB5O95377 273 aa23.17■■□□□ 1.3
SNX13-206ENST00000474067 NEK4P51957 841 aa23.17■■□□□ 1.3
SNX13-206ENST00000474067 Q4G0T1 1027 aa23.17■■□□□ 1.3
SNX13-206ENST00000474067 PCYT2Q99447 389 aa23.17■■□□□ 1.3
SNX13-206ENST00000474067 LARP6Q9BRS8 491 aaKnown RBP23.17■■□□□ 1.3
SNX13-206ENST00000474067 TSPYL2Q9H2G4 693 aaPredicted RBP23.17■■□□□ 1.3
SNX13-206ENST00000474067 PRDM12Q9H4Q4 367 aa23.17■■□□□ 1.3
SNX13-206ENST00000474067 RNF216Q9NWF9 866 aaPredicted RBP23.17■■□□□ 1.3
SNX13-206ENST00000474067 INSL6Q9Y581 213 aa23.17■■□□□ 1.3
SNX13-206ENST00000474067 GBF1Q92538 1859 aa23.16■■□□□ 1.3
SNX13-206ENST00000474067 SMIM35A0A1B0GVV1 85 aa23.16■■□□□ 1.3
SNX13-206ENST00000474067 DHX15O43143 795 aaKnown RBP23.16■■□□□ 1.3
SNX13-206ENST00000474067 GTPBP6O43824 516 aaPredicted RBP23.16■■□□□ 1.3
SNX13-206ENST00000474067 GCFC2P16383 781 aaKnown RBP23.16■■□□□ 1.3
SNX13-206ENST00000474067 TRIM29Q14134 588 aa23.16■■□□□ 1.3
SNX13-206ENST00000474067 MBTPS1Q14703 1052 aa23.16■■□□□ 1.3
SNX13-206ENST00000474067 SWSAP1Q6NVH7 229 aa23.16■■□□□ 1.3
SNX13-206ENST00000474067 TELO2Q9Y4R8 837 aa23.16■■□□□ 1.3
SNX13-206ENST00000474067 CCNE2O96020 404 aa23.15■■□□□ 1.3
SNX13-206ENST00000474067 MRPS6P82932 125 aaKnown RBP23.15■■□□□ 1.3
SNX13-206ENST00000474067 LRCH2Q5VUJ6 765 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms