RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 CRYGNQ8WXF5 182 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 SLC26A6Q9BXS9 759 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 UPF3BQ9BZI7 483 aaKnown RBP17.52■□□□□ 0.4
COL1A1-203ENST00000471344 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 MTUS1Q9ULD2 1270 aa17.52■□□□□ 0.4
COL1A1-203ENST00000471344 NFASCO94856 1347 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 IGLV3-22A0A075B6J6 115 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 ESYT2A0FGR8 921 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 MAFGO15525 162 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 PRPF3O43395 683 aaKnown RBP17.51■□□□□ 0.39
COL1A1-203ENST00000471344 PSMA5P28066 241 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 MGAT3Q09327 533 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 RUFY3Q7L099 469 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 MYOCDQ8IZQ8 938 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 GDPD5Q8WTR4 605 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 ZMYND12Q9H0C1 365 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 SMARCAD1Q9H4L7 1026 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 VPS54Q9P1Q0 977 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 MTCH2Q9Y6C9 303 aa17.51■□□□□ 0.39
COL1A1-203ENST00000471344 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.5■□□□□ 0.39
COL1A1-203ENST00000471344 MBLAC1A4D2B0 266 aaPredicted RBP17.5■□□□□ 0.39
COL1A1-203ENST00000471344 LINC01553A4QN01 128 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 LPXNO60711 386 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 DTNBO60941 627 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 CAND2O75155 1236 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 GHRP10912 638 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 INSRRP14616 1297 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 ZNF76P36508 570 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 EVCP57679 992 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 GRB10Q13322 594 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 PLCB4Q15147 1175 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 FAM26DQ5JW98 314 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 PLA2G4DQ86XP0 818 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 DNAJB3Q8WWF6 145 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 RAD9AQ99638 391 aa17.5■□□□□ 0.39
COL1A1-203ENST00000471344 DHX15O43143 795 aaKnown RBP17.49■□□□□ 0.39
COL1A1-203ENST00000471344 EDIL3O43854 480 aa17.49■□□□□ 0.39
COL1A1-203ENST00000471344 EFCAB14O75071 495 aa17.49■□□□□ 0.39
COL1A1-203ENST00000471344 IFNAR1P17181 557 aa17.49■□□□□ 0.39
COL1A1-203ENST00000471344 REXO1Q8N1G1 1221 aaKnown RBP17.49■□□□□ 0.39
COL1A1-203ENST00000471344 SEPT8Q92599 483 aa17.49■□□□□ 0.39
COL1A1-203ENST00000471344 FAM49AQ9H0Q0 323 aaPredicted RBP17.49■□□□□ 0.39
COL1A1-203ENST00000471344 GLT8D2Q9H1C3 349 aa17.49■□□□□ 0.39
COL1A1-203ENST00000471344 TRPC6Q9Y210 931 aa17.49■□□□□ 0.39
COL1A1-203ENST00000471344 TTC28Q96AY4 2481 aa17.49■□□□□ 0.39
COL1A1-203ENST00000471344 UPP2O95045 317 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 AMHP03971 560 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 CYP3A4P08684 503 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 TMEM62Q0P6H9 643 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 STK3Q13188 491 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 LPIN1Q14693 890 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 NIPA1Q7RTP0 329 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 CCDC60Q8IWA6 550 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-203ENST00000471344 TEX2Q8IWB9 1127 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 RNF26Q9BY78 433 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-203ENST00000471344 IFIH1Q9BYX4 1025 aaKnown RBP17.48■□□□□ 0.39
COL1A1-203ENST00000471344 AZI2Q9H6S1 392 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 C6orf50Q9HD87 102 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 THEGQ9P2T0 379 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 CYP46A1Q9Y6A2 500 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 CDY2AQ9Y6F7 541 aa17.48■□□□□ 0.39
COL1A1-203ENST00000471344 LOXHD1Q8IVV2 1947 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 ATG7O95352 703 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 STAT5BP51692 787 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 AKAP17AQ02040 695 aaKnown RBP17.47■□□□□ 0.39
COL1A1-203ENST00000471344 TFF2Q03403 129 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 TAF2Q6P1X5 1199 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 ABHD15Q6UXT9 468 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 RPAINQ86UA6 219 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 LENG9Q96B70 501 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 C17orf80Q9BSJ5 609 aa17.47■□□□□ 0.39
COL1A1-203ENST00000471344 IGKV6D-21A0A0A0MT36 114 aa17.46■□□□□ 0.39
COL1A1-203ENST00000471344 IPO5O00410 1097 aaKnown RBP17.46■□□□□ 0.39
COL1A1-203ENST00000471344 POU3F3P20264 500 aaPredicted RBP17.46■□□□□ 0.39
COL1A1-203ENST00000471344 HTRA4P83105 476 aaPredicted RBP17.46■□□□□ 0.39
COL1A1-203ENST00000471344 PRR16Q569H4 304 aa17.46■□□□□ 0.39
COL1A1-203ENST00000471344 TJAP1Q5JTD0 557 aa17.46■□□□□ 0.39
COL1A1-203ENST00000471344 FBXO47Q5MNV8 452 aa17.46■□□□□ 0.39
COL1A1-203ENST00000471344 PLPPR4Q7Z2D5 763 aa17.46■□□□□ 0.39
COL1A1-203ENST00000471344 CCDC12Q8WUD4 166 aaPredicted RBP17.46■□□□□ 0.39
COL1A1-203ENST00000471344 AGO3Q9H9G7 860 aaKnown RBP17.46■□□□□ 0.39
COL1A1-203ENST00000471344 SUGCTQ9HAC7 445 aa17.46■□□□□ 0.39
COL1A1-203ENST00000471344 PPP4R2Q9NY27 417 aa17.46■□□□□ 0.39
COL1A1-203ENST00000471344 COL4A6Q14031 1691 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 POTEB3A0JP26 581 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 RRN3P2A6NIE6 340 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 BACH1O14867 736 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 EPB41L2O43491 1005 aaKnown RBP17.45■□□□□ 0.38
COL1A1-203ENST00000471344 GTPBP6O43824 516 aaPredicted RBP17.45■□□□□ 0.38
COL1A1-203ENST00000471344 ATP4AP20648 1035 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 ERVK-21P61565 698 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 MRPS6P82932 125 aaKnown RBP17.45■□□□□ 0.38
COL1A1-203ENST00000471344 SKIV2LQ15477 1246 aaKnown RBP17.45■□□□□ 0.38
COL1A1-203ENST00000471344 POTEBQ6S5H4 581 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 SP7Q8TDD2 431 aaPredicted RBP17.45■□□□□ 0.38
COL1A1-203ENST00000471344 LINC01599Q8WXQ3 324 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 GJA10Q969M2 543 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms