RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 ZFP69BQ9UJL9 534 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 ESYT3A0FGR9 886 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 SCDO00767 359 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 FOXD2O60548 495 aaPredicted RBP5.76□□□□□ -1.49
GPNMB-207ENST00000468723 FBXO21O94952 628 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 ASMTLO95671 621 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 KCNA6P17658 529 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 CDK11BP21127 795 aaKnown RBP5.76□□□□□ -1.49
GPNMB-207ENST00000468723 CNR2P34972 360 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 LACTBP83111 547 aaPredicted RBP5.76□□□□□ -1.49
GPNMB-207ENST00000468723 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 GIMAP6Q6P9H5 292 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 STPG3Q8N7X2 389 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 IGSF22Q8N9C0 903 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 DLL4Q9NR61 685 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 ARHGAP20Q9P2F6 1191 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 CADPSQ9ULU8 1353 aa5.76□□□□□ -1.49
GPNMB-207ENST00000468723 PRAMEF25A6NGN4 478 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 MROH6A6NGR9 719 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 ZNF839A8K0R7 811 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 KCNQ2O43526 872 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 CYP7B1O75881 506 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 CANXP27824 592 aaKnown RBP5.75□□□□□ -1.49
GPNMB-207ENST00000468723 DBPQ10586 325 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-207ENST00000468723 SEC23AQ15436 765 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 FIGNQ5HY92 759 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 FAM26FQ5R3K3 315 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 FSTL4Q6MZW2 842 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 LCORQ96JN0 433 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-207ENST00000468723 RNPC3Q96LT9 517 aaKnown RBP5.75□□□□□ -1.49
GPNMB-207ENST00000468723 TEPSINQ96N21 525 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 WRNIP1Q96S55 665 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 TACO1Q9BSH4 297 aaKnown RBP5.75□□□□□ -1.49
GPNMB-207ENST00000468723 CELF4Q9BZC1 486 aaKnown RBP5.75□□□□□ -1.49
GPNMB-207ENST00000468723 PDGFDQ9GZP0 370 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-207ENST00000468723 TMEM168Q9H0V1 697 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 ARHGAP28Q9P2N2 729 aa5.75□□□□□ -1.49
GPNMB-207ENST00000468723 MYO15BQ96JP2 1530 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 IL18BPO95998 194 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 C4BPAP04003 597 aaKnown RBP5.74□□□□□ -1.49
GPNMB-207ENST00000468723 KIAA2012Q0VF49 1180 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 TM4SF20Q53R12 229 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 OVCH1Q7RTY7 1134 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 FAM124AQ86V42 546 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 NUDT10Q8NFP7 164 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 IGDCC4Q8TDY8 1250 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 NUDT11Q96G61 164 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 YTHDC1Q96MU7 727 aaKnown RBP5.74□□□□□ -1.49
GPNMB-207ENST00000468723 TMEM260Q9NX78 707 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 FTSJ1Q9UET6 329 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 ZDHHC9Q9Y397 364 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 CC2D2AQ9P2K1 1620 aa5.74□□□□□ -1.49
GPNMB-207ENST00000468723 B8ZZF3 427 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 OPA1O60313 960 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 CLASP2O75122 1294 aaKnown RBP5.73□□□□□ -1.49
GPNMB-207ENST00000468723 DNAJC8O75937 253 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-207ENST00000468723 KRT37O76014 449 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 COL6A1P12109 1028 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 SYN1P17600 705 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 SDSP20132 328 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 MC4RP32245 332 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 ZNF460Q14592 562 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 SMAD2Q15796 467 aaKnown RBP5.73□□□□□ -1.49
GPNMB-207ENST00000468723 FNDC3BQ53EP0 1204 aaKnown RBP5.73□□□□□ -1.49
GPNMB-207ENST00000468723 TMEM177Q53S58 311 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 HHIPL2Q6UWX4 724 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 C2orf69Q8N8R5 385 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 BDH2Q9BUT1 245 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 INVSQ9Y283 1065 aa5.73□□□□□ -1.49
GPNMB-207ENST00000468723 TNPO3Q9Y5L0 923 aaKnown RBP5.73□□□□□ -1.49
GPNMB-207ENST00000468723 M0R2C6 588 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 PPM1GO15355 546 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-207ENST00000468723 MMEP08473 750 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 GJA4P35212 333 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 PLP2Q04941 152 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 TMEM132BQ14DG7 1078 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 PKN3Q6P5Z2 889 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 NOSTRINQ8IVI9 506 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 CXorf38Q8TB03 319 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 KCND1Q9NSA2 647 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 SAMD15Q9P1V8 674 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 DCAF1Q9Y4B6 1507 aa5.72□□□□□ -1.49
GPNMB-207ENST00000468723 SLC12A8A0AV02 714 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 C9orf118A6NHY6 69 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 GLRX3O76003 335 aaKnown RBP5.71□□□□□ -1.5
GPNMB-207ENST00000468723 KNG1P01042 644 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 IGFALSP35858 605 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 NFATC3Q12968 1075 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 PABPC4Q13310 644 aaKnown RBP eCLIP5.71□□□□□ -1.5
GPNMB-207ENST00000468723 ZFYVE27Q5T4F4 411 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 ZCCHC8Q6NZY4 707 aaKnown RBP5.71□□□□□ -1.5
GPNMB-207ENST00000468723 BORAQ6PGQ7 559 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 DDX53Q86TM3 631 aaKnown RBP5.71□□□□□ -1.5
GPNMB-207ENST00000468723 NOP9Q86U38 636 aaKnown RBP5.71□□□□□ -1.5
GPNMB-207ENST00000468723 LGI4Q8N135 537 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 FANCLQ9NW38 375 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 UCKL1Q9NWZ5 548 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 CD2APQ9Y5K6 639 aa5.71□□□□□ -1.5
GPNMB-207ENST00000468723 MRPL42Q9Y6G3 142 aaKnown RBP5.71□□□□□ -1.5
GPNMB-207ENST00000468723 ZNF536O15090 1300 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms