RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 MPHOSPH10O00566 681 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 KRT18P05783 430 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 FAM228BP0C875 321 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 EPS15P42566 896 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 MMP14P50281 582 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 RBM5P52756 815 aaKnown RBP eCLIP17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 MARSP56192 900 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 KLHL30Q0D2K2 578 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 IFT20Q8IY31 132 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 FAM133AQ8N9E0 248 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 KCTD10Q9H3F6 313 aa17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 ATF5Q9Y2D1 282 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L15C9J2P7 530 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L13C9JLJ4 530 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L11C9JVI0 530 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L18D6R9N7 530 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L22D6RA61 530 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L17D6RBQ6 530 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L19D6RCP7 530 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L20D6RJB6 530 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 GLI1P08151 1106 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 CYP11B2P19099 503 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L24Q0WX57 530 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 KIAA0753Q2KHM9 967 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 STYK1Q6J9G0 422 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 USP17L6PQ6QN14 398 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 CAPS2Q9BXY5 557 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 ADAMTS1Q9UHI8 967 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 SLC15A2Q16348 729 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 ASIC2Q16515 512 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 AOC3Q16853 763 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 DNAJC21Q5F1R6 531 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 DACT2Q5SW24 774 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 GPATCH11Q8N954 259 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 NAP1L4Q99733 375 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 TNS1Q9HBL0 1735 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 SWAP70Q9UH65 585 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 PACSIN2Q9UNF0 486 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 MYH7BA7E2Y1 1941 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 HEXIM1O94992 359 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 CARSP49589 748 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 SHROOM1Q2M3G4 852 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 MEI1Q5TIA1 1274 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 ARL8AQ96BM9 186 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 PACSIN1Q9BY11 444 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 PDGFDQ9GZP0 370 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 EPB41L5Q9HCM4 733 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 AIPL1Q9NZN9 384 aa17.34■□□□□ 0.37
TSPAN4-211ENST00000468468 SCN9AQ15858 1988 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 STAT3P40763 770 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 CORO7P57737 925 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 GUCY2DQ02846 1103 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 KCNH2Q12809 1159 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 GBP6Q6ZN66 633 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 IFT81Q8WYA0 676 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 ZDHHC15Q96MV8 337 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 GANQ9H2C0 597 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 DNAJC18Q9H819 358 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 GDF3Q9NR23 364 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 NFU1Q9UMS0 254 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 ZSCAN5CA6NGD5 496 aaPredicted RBP17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 CETN3O15182 167 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 RAD21O60216 631 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 MED24O75448 989 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 HLA-DOAP06340 250 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 EPB41P11171 864 aaKnown RBP17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 MAGEA9P43362 315 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 RNASE9P60153 205 aaKnown RBP17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 NNTQ13423 1086 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 TTMPQ5BVD1 217 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 STRIP1Q5VSL9 837 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 ZIM3Q96PE6 472 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 PCDHGC5Q9Y5F6 944 aa17.33■□□□□ 0.36
TSPAN4-211ENST00000468468 ESYT3A0FGR9 886 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 GNGT1P63211 74 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 ARSHQ5FYA8 562 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 KRT12Q99456 494 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 EHD4Q9H223 541 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 GRID2IPA4D2P6 1211 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 DDTLA6NHG4 134 aaPredicted RBP17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 FAM153BP0C7A2 387 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 NR2F2P24468 414 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 FAM153CQ494X1 144 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 PACS2Q86VP3 889 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 KCNMB3Q9NPA1 279 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 FAM153AQ9UHL3 310 aa17.32■□□□□ 0.36
TSPAN4-211ENST00000468468 POTEFA5A3E0 1075 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 POTEIP0CG38 1075 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 ACTN1P12814 892 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 PAK2Q13177 524 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 QRICH1Q2TAL8 776 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 EDRF1Q3B7T1 1238 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 POTEGQ6S5H5 508 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 POTEEQ6S8J3 1075 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 ZC3H3Q8IXZ2 948 aaKnown RBP17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 CCDC43Q96MW1 224 aaKnown RBP17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 ANO3Q9BYT9 981 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 PCDHA1Q9Y5I3 950 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms