RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 YBX2Q9Y2T7 364 aaKnown RBP13.11□□□□□ -0.31
CDHR3-205ENST00000468143 EMSYQ7Z589 1322 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 M0R2N6 131 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 BACH1O14867 736 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 TDP2O95551 362 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 CXCL10P02778 98 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 FDPSP14324 419 aaKnown RBP13.1□□□□□ -0.31
CDHR3-205ENST00000468143 CIITAP33076 1130 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 USP11P51784 963 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 FOSBP53539 338 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 SETQ01105 290 aaPredicted RBP13.1□□□□□ -0.31
CDHR3-205ENST00000468143 MARCH8Q5T0T0 291 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 MIS18BP1Q6P0N0 1132 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 ABHD15Q6UXT9 468 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 PLPPR4Q7Z2D5 763 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 DAGLBQ8NCG7 672 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 TRAPPC12Q8WVT3 735 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 LENG9Q96B70 501 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 PHF20Q9BVI0 1012 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 TBC1D22BQ9NU19 505 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 STXBP5LQ9Y2K9 1186 aa13.1□□□□□ -0.31
CDHR3-205ENST00000468143 LAMA3Q16787 3333 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 IGKV6D-21A0A0A0MT36 114 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 MSH4O15457 936 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 JAK2O60674 1132 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 PARNO95453 639 aaKnown RBP13.09□□□□□ -0.31
CDHR3-205ENST00000468143 RAB30Q15771 203 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 INF2Q27J81 1249 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 CNKSR3Q6P9H4 555 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 CCDC60Q8IWA6 550 aaPredicted RBP13.09□□□□□ -0.31
CDHR3-205ENST00000468143 DBF4BQ8NFT6 615 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 DNAJB3Q8WWF6 145 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 GTF3C6Q969F1 213 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 SLC28A3Q9HAS3 691 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 ZNF302Q9NR11 478 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 TUBE1Q9UJT0 475 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 SAMM50Q9Y512 469 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 STK36Q9NRP7 1315 aa13.09□□□□□ -0.31
CDHR3-205ENST00000468143 SCN5AQ14524 2016 aa13.08□□□□□ -0.31
CDHR3-205ENST00000468143 POTEB3A0JP26 581 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 RRN3P2A6NIE6 340 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 CHMP2AO43633 222 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 BAIAP3O94812 1187 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 XBP1P17861 261 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 KCNJ6P48051 423 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.32
CDHR3-205ENST00000468143 DEFB103AP81534 67 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 ST3GAL1Q11201 340 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 IKBKEQ14164 716 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 NONOQ15233 471 aaKnown RBP eCLIP13.08□□□□□ -0.32
CDHR3-205ENST00000468143 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 GALNT17Q6IS24 598 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 POTEBQ6S5H4 581 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
CDHR3-205ENST00000468143 CKAP2LQ8IYA6 745 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
CDHR3-205ENST00000468143 WASF1Q92558 559 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 KIF2CQ99661 725 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 C22orf23Q9BZE7 217 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 FAM49AQ9H0Q0 323 aaPredicted RBP13.08□□□□□ -0.32
CDHR3-205ENST00000468143 GABBR1Q9UBS5 961 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 SZT2Q5T011 3432 aa13.08□□□□□ -0.32
CDHR3-205ENST00000468143 TMEM265A0A087WTH1 108 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 MBLAC1A4D2B0 266 aaPredicted RBP13.07□□□□□ -0.32
CDHR3-205ENST00000468143 CHRNA1P02708 482 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 PSAPP07602 524 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 ATP4AP20648 1035 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 TMEM62Q0P6H9 643 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 LETM2Q2VYF4 491 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 Q4G0T1 1027 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 EARS2Q5JPH6 523 aaKnown RBP13.07□□□□□ -0.32
CDHR3-205ENST00000468143 FAM26DQ5JW98 314 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 ZNF746Q6NUN9 644 aaPredicted RBP13.07□□□□□ -0.32
CDHR3-205ENST00000468143 PIK3AP1Q6ZUJ8 805 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 KRT25Q7Z3Z0 450 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 CCDC83Q8IWF9 413 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 PHOSPHO2Q8TCD6 241 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
CDHR3-205ENST00000468143 SLC9A7Q96T83 725 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 PRDM12Q9H4Q4 367 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 CERS4Q9HA82 394 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 TCEAL9Q9UHQ7 104 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 LIMCH1Q9UPQ0 1083 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 PCDHA11Q9Y5I1 949 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 PCDHA10Q9Y5I2 948 aa13.07□□□□□ -0.32
CDHR3-205ENST00000468143 ABHD14A-ACY1A0A1B0GW23 586 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 FAM205CA6NFA0 338 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 GAS7O60861 476 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 CAND2O75155 1236 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 CA3P07451 260 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 FOSL2P15408 326 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 KLRC1P26715 233 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 KRT76Q01546 638 aa13.06□□□□□ -0.32
CDHR3-205ENST00000468143 NR5A1Q13285 461 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms