RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 MARCH6O60337 910 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 SORBS3O60504 671 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 SMIM10L2AP0DMW4 78 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 SMIM10L2BP0DMW5 78 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 PRPHP41219 470 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 ADAM17P78536 824 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 SPIRE1Q08AE8 756 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 PTK7Q13308 1070 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 BFSP2Q13515 415 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 UTP14CQ5TAP6 766 aaKnown RBP15.44■□□□□ 0.06
LIMD1-203ENST00000465039 TAF2Q6P1X5 1199 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 FAM43BQ6ZT52 329 aaPredicted RBP15.44■□□□□ 0.06
LIMD1-203ENST00000465039 RPAINQ86UA6 219 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 SERINC5Q86VE9 423 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 CCDC60Q8IWA6 550 aaPredicted RBP15.44■□□□□ 0.06
LIMD1-203ENST00000465039 BBXQ8WY36 941 aaPredicted RBP15.44■□□□□ 0.06
LIMD1-203ENST00000465039 UNC45AQ9H3U1 944 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 ZSCAN16Q9H4T2 348 aaPredicted RBP15.44■□□□□ 0.06
LIMD1-203ENST00000465039 HDAC6Q9UBN7 1215 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 PCDHA12Q9UN75 941 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 CEP131Q9UPN4 1083 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 NOD1Q9Y239 953 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 SAMM50Q9Y512 469 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 PPME1Q9Y570 386 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 STK24Q9Y6E0 443 aa15.44■□□□□ 0.06
LIMD1-203ENST00000465039 WDR81Q562E7 1941 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 A0A1W2PPC1 479 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 C17orf102A2RUQ5 167 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 MBLAC1A4D2B0 266 aaPredicted RBP15.43■□□□□ 0.06
LIMD1-203ENST00000465039 H0YGN5 161 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 DDX39AO00148 427 aaKnown RBP15.43■□□□□ 0.06
LIMD1-203ENST00000465039 STX6O43752 255 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 HBP1O60381 514 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 TIMP1P01033 207 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 OR52Z1P0C646 297 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 PPFIA1Q13136 1202 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 PTGISQ16647 500 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 PDXDC2PQ6P474 469 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 MIER3Q7Z3K6 550 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 LBHD1Q9BQE6 289 aaPredicted RBP15.43■□□□□ 0.06
LIMD1-203ENST00000465039 NOC4LQ9BVI4 516 aaKnown RBP15.43■□□□□ 0.06
LIMD1-203ENST00000465039 RAB34Q9BZG1 259 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.43■□□□□ 0.06
LIMD1-203ENST00000465039 TELO2Q9Y4R8 837 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 MORC2Q9Y6X9 1032 aaPredicted RBP15.43■□□□□ 0.06
LIMD1-203ENST00000465039 KAT6AQ92794 2004 aa15.43■□□□□ 0.06
LIMD1-203ENST00000465039 TANC1Q9C0D5 1861 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 POTEB3A0JP26 581 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 VPS37CA5D8V6 355 aaPredicted RBP15.42■□□□□ 0.06
LIMD1-203ENST00000465039 RAG1P15918 1043 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 MCM7P33993 719 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 BMP8BP34820 402 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 RFC2P35250 354 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 TOB1P50616 345 aaPredicted RBP15.42■□□□□ 0.06
LIMD1-203ENST00000465039 PLCB4Q15147 1175 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 EPHA7Q15375 998 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 TMEM266Q2M3C6 531 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 ZNF484Q5JVG2 852 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 ARL6IP4Q66PJ3 421 aaKnown RBP15.42■□□□□ 0.06
LIMD1-203ENST00000465039 GDF6Q6KF10 455 aaPredicted RBP15.42■□□□□ 0.06
LIMD1-203ENST00000465039 SWSAP1Q6NVH7 229 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 POTEBQ6S5H4 581 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 ZNF710Q8N1W2 664 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 LMBR1Q8WVP7 490 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 CTAGE1Q96RT6 745 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 TRPV6Q9H1D0 765 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 HIPK3Q9H422 1215 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 RNPEPQ9H4A4 650 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 TTC12Q9H892 705 aaPredicted RBP15.42■□□□□ 0.06
LIMD1-203ENST00000465039 TRMT13Q9NUP7 481 aaKnown RBP15.42■□□□□ 0.06
LIMD1-203ENST00000465039 MTMR6Q9Y217 621 aa15.42■□□□□ 0.06
LIMD1-203ENST00000465039 TRIM43BA6NCK2 446 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 WNT7AO00755 349 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 P4HBP07237 508 aaKnown RBP15.41■□□□□ 0.06
LIMD1-203ENST00000465039 PFKMP08237 780 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 MUTP22033 750 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 QARSP47897 775 aaKnown RBP15.41■□□□□ 0.06
LIMD1-203ENST00000465039 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.064e-6■■□□□ 13.5
LIMD1-203ENST00000465039 PSMC5P62195 406 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 PDIA5Q14554 519 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 GRIK4Q16099 956 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 MFSD5Q6N075 450 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 TRIM43Q96BQ3 446 aaPredicted RBP15.41■□□□□ 0.06
LIMD1-203ENST00000465039 GDF15Q99988 308 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 PRDM5Q9NQX1 630 aaPredicted RBP15.41■□□□□ 0.06
LIMD1-203ENST00000465039 GABBR1Q9UBS5 961 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 TUBE1Q9UJT0 475 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 TRPC6Q9Y210 931 aa15.41■□□□□ 0.06
LIMD1-203ENST00000465039 CHMP2AO43633 222 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 LYPLA2O95372 231 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 OATP04181 439 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 ATP2C1P98194 919 aaPredicted RBP15.4■□□□□ 0.06
LIMD1-203ENST00000465039 XKR3Q5GH77 459 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 TMEM199Q8N511 208 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 KCTD17Q8N5Z5 321 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 C4orf32Q8N8J7 132 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 ERMNQ8TAM6 284 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 TMEM60Q9H2L4 133 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 NRBP2Q9NSY0 501 aa15.4■□□□□ 0.06
LIMD1-203ENST00000465039 MAGEB2O15479 319 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms