RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	GPRASP2	Q96D09	838 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	HVCN1	Q96D96	273 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	RUNDC3B	Q96NL0	473 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	UIMC1	Q96RL1	719 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	MAF1	Q9H063	256 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	MEIS1	O00470	390 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	KRT31	Q15323	416 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	ERO1B	Q86YB8	467 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	MYRIP	Q8NFW9	859 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	TRIM9	Q9C026	710 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	TMEM39B	Q9GZU3	492 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	ZNF302	Q9NR11	478 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	SAR1B	Q9Y6B6	198 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	PDXK	O00764	312 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	MXI1	P50539	228 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	MTERF2	Q49AM1	385 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	DCUN1D2	Q6PH85	259 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	CCDC50	Q8IVM0	306 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	RDH13	Q8NBN7	331 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	DYDC2	Q96IM9	177 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	MAK16	Q9BXY0	300 aa	Known RBP	12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	SENP2	Q9HC62	589 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	GOLGA6L7	A0A1B0GV03	622 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	CD19	P15391	556 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	ATP2A2	P16615	1042 aa	Known RBP	12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	ANXA13	P27216	316 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	CASP14	P31944	242 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	SHMT1	P34896	483 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	NFIA	Q12857	509 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	CFAP58	Q5T655	872 aa		12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	RNF216	Q9NWF9	866 aa	Predicted RBP	12.84	□□□□□ -0.35
RBM39-223	ENST00000463004	SERPING1	P05155	500 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	EZR	P15311	586 aa	Known RBP	12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	RPA1	P27694	616 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	EFNA5	P52803	228 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	ARHGAP44	Q17R89	818 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	XKR3	Q5GH77	459 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	MAATS1	Q7Z4T9	603 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	IFT20	Q8IY31	132 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	XXYLT1	Q8NBI6	393 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	MXRA8	Q9BRK3	442 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	SAMSN1	Q9NSI8	373 aa	Known RBP	12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	SLC9A2	Q9UBY0	812 aa		12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.83	□□□□□ -0.35
RBM39-223	ENST00000463004	AFDN	P55196	1824 aa	Known RBP	12.83	□□□□□ -0.36
RBM39-223	ENST00000463004		A6NNZ2	444 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	TUBB8	Q3ZCM7	444 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	KRT222	Q8N1A0	295 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	PDLIM2	Q96JY6	352 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	ANKEF1	Q9NU02	776 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	GINS2	Q9Y248	185 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	SLC16A3	O15427	465 aa	Known RBP	12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	KRT19	P08727	400 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	GBP1	P32455	592 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	RHBDL3	P58872	404 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	SNAP25	P60880	206 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	PTPA	Q15257	358 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	PSPC1	Q8WXF1	523 aa	Known RBP	12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	FAM107B	Q9H098	131 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	IKBKG	Q9Y6K9	419 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	DGAT1	O75907	488 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	SREBF1	P36956	1147 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	PHKA2	P46019	1235 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	KCNJ6	P48051	423 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	BACE1	P56817	501 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	C8orf74	Q6P047	294 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	GPR161	Q8N6U8	529 aa	Known RBP	12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	ENGASE	Q8NFI3	743 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	U2AF1L4	Q8WU68	220 aa	Known RBP	12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	LXN	Q9BS40	222 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	HESX1	Q9UBX0	185 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	PARP2	Q9UGN5	583 aa		12.83	□□□□□ -0.36
RBM39-223	ENST00000463004	POTEB3	A0JP26	581 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	TMEM110-MUSTN1	A8MSY1	372 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	POTEC	B2RU33	542 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	INO80B-WBP1	J3KQ70	363 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	CXCL11	O14625	94 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	TLR3	O15455	904 aa	Known RBP	12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	PIK3CA	P42336	1068 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	DPYD	Q12882	1025 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	EDRF1	Q3B7T1	1238 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	POTEB	Q6S5H4	581 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	FRMD5	Q7Z6J6	570 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	C17orf75	Q9HAS0	396 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	JPH1	Q9HDC5	661 aa	Predicted RBP	12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	PRCP	P42785	496 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	LRRC41	Q15345	812 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	ENOSF1	Q7L5Y1	443 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	HDX	Q7Z353	690 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	METTL16	Q86W50	562 aa	Known RBP	12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	SFR1	Q86XK3	245 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	PPM1K	Q8N3J5	372 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	DYDC1	Q8WWB3	177 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	MTR	Q99707	1265 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	HAUS2	Q9NVX0	235 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	CEP72	Q9P209	647 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	AKT3	Q9Y243	479 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	ZBTB22	O15209	634 aa		12.82	□□□□□ -0.36

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