RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 VTA1Q9NP79 307 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 LUC7LQ9NQ29 371 aaKnown RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 KCNH7Q9NS40 1196 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 MKS1Q9NXB0 559 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 MYOTQ9UBF9 498 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 FBLN5Q9UBX5 448 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 IP6K2Q9UHH9 426 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 KCNG1Q9UIX4 513 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 ADAMTS6Q9UKP5 1117 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 LUC7L2Q9Y383 392 aaKnown RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 PCDHB4Q9Y5E5 795 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 TNKSO95271 1327 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 GOLGA6CA6NDK9 693 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 GOLGA6BA6NDN3 693 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 DBX1A6NMT0 343 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 TGM5O43548 720 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 XPOTO43592 962 aaKnown RBP4.17□□□□□ -1.74
VCL-203ENST00000461383 PRC1O43663 620 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 KDM1AO60341 852 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 PSPNO60542 156 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 GOLGA6DP0CG33 693 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 GJA4P35212 333 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 GDNFP39905 211 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 ERVFC1P60507 584 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 GRIN1Q05586 938 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 TUSC3Q13454 348 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 LRRC41Q15345 812 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 NR0B2Q15466 257 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 EMC4Q5J8M3 183 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 CREB3L3Q68CJ9 461 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 CC2D1AQ6P1N0 951 aaPredicted RBP4.17□□□□□ -1.74
VCL-203ENST00000461383 TTLL7Q6ZT98 887 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 RASSF3Q86WH2 238 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 RBM12BQ8IXT5 1001 aaKnown RBP4.17□□□□□ -1.74
VCL-203ENST00000461383 ZNF610Q8N9Z0 462 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 SH3RF2Q8TEC5 729 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 MYLIPQ8WY64 445 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 ERCC4Q92889 916 aaPredicted RBP4.17□□□□□ -1.74
VCL-203ENST00000461383 PEX11GQ96HA9 241 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 FUBP3Q96I24 572 aaKnown RBP eCLIP4.17□□□□□ -1.74
VCL-203ENST00000461383 C8orf48Q96LL4 319 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 GEMIN8Q9NWZ8 242 aaKnown RBP4.17□□□□□ -1.74
VCL-203ENST00000461383 GOLGA6AQ9NYA3 693 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 NOB1Q9ULX3 412 aaKnown RBP4.17□□□□□ -1.74
VCL-203ENST00000461383 SIT1Q9Y3P8 196 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 B3GALT1Q9Y5Z6 326 aa4.17□□□□□ -1.74
VCL-203ENST00000461383 ZC3H12DA2A288 527 aaKnown RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 NUDT19A8MXV4 375 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 F8W031 263 aaPredicted RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 K7ESF4 209 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 DVL2O14641 736 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 KIF3BO15066 747 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 BUB1BO60566 1050 aaPredicted RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 FARP2O94887 1054 aaPredicted RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 HPXP02790 462 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 GLI4P10075 376 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 PNLIPP16233 465 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 ZSCAN20P17040 1043 aaPredicted RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 PTPN1P18031 435 aaKnown RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 PTX3P26022 381 aaPredicted RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 TRHRP34981 398 aaPredicted RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 GALK1P51570 392 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 ERVK-21P61565 698 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 PHC1P78364 1004 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 SMAD3P84022 425 aaKnown RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 SNX17Q15036 470 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 ACAP2Q15057 778 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 SMAD2Q15796 467 aaKnown RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 FSTL4Q6MZW2 842 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 FRMD7Q6ZUT3 714 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 NME9Q86XW9 330 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 CCAR1Q8IX12 1150 aaKnown RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 CCDC146Q8IYE0 955 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 C7orf31Q8N865 590 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 HIPK4Q8NE63 616 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 FAM168AQ92567 244 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 POLR3GLQ9BT43 218 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 ZDHHC5Q9C0B5 715 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 RXFP1Q9HBX9 757 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 TOPORSQ9NS56 1045 aaPredicted RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 ASH2LQ9UBL3 628 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 GABBR1Q9UBS5 961 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 MSRAQ9UJ68 235 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 PALD1Q9ULE6 856 aa4.16□□□□□ -1.74
VCL-203ENST00000461383 ARID4BQ4LE39 1312 aaPredicted RBP4.16□□□□□ -1.74
VCL-203ENST00000461383 FOXP2O15409 715 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 SGSM2O43147 1006 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 TADA3O75528 432 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 APOL3O95236 402 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 ZBTB7AO95365 584 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 LTFP02788 710 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 CYBBP04839 570 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 MPOP05164 745 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 DBHP09172 617 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 RECQLP46063 649 aaPredicted RBP4.15□□□□□ -1.75
VCL-203ENST00000461383 EPHA5P54756 1037 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 TBX4P57082 545 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 ADCY1Q08828 1119 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 LRRC32Q14392 662 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms