RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 NIPA1Q7RTP0 329 aa11.03□□□□□ -0.64
CD40-203ENST00000461171 ZMYND12Q9H0C1 365 aa11.03□□□□□ -0.64
CD40-203ENST00000461171 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
CD40-203ENST00000461171 AGO4Q9HCK5 861 aaKnown RBP11.03□□□□□ -0.64
CD40-203ENST00000461171 THEGQ9P2T0 379 aa11.03□□□□□ -0.64
CD40-203ENST00000461171 SLC9A2Q9UBY0 812 aa11.03□□□□□ -0.64
CD40-203ENST00000461171 MTCH2Q9Y6C9 303 aa11.03□□□□□ -0.64
CD40-203ENST00000461171 MUC3AQ02505 3323 aa11.03□□□□□ -0.64
CD40-203ENST00000461171 KAT6AQ92794 2004 aa11.02□□□□□ -0.64
CD40-203ENST00000461171 IGLV3-22A0A075B6J6 115 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 FAM86B1E9PN63 330 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 RFXAPO00287 272 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 PRPF3O43395 683 aaKnown RBP11.02□□□□□ -0.65
CD40-203ENST00000461171 CCNE2O96020 404 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 CHRNA1P02708 482 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 CYP3A4P08684 503 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 FAM86B2P0C5J1 330 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 MARK3P27448 753 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 PSMA5P28066 241 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 ACTR2P61160 394 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 HTRA4P83105 476 aaPredicted RBP11.02□□□□□ -0.65
CD40-203ENST00000461171 GRIK4Q16099 956 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
CD40-203ENST00000461171 RUFY4Q6ZNE9 571 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 ARNTL2Q8WYA1 636 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 SEPT8Q92599 483 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 GLG1Q92896 1179 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 RAD9AQ99638 391 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 RNF26Q9BY78 433 aaPredicted RBP11.02□□□□□ -0.65
CD40-203ENST00000461171 CERS4Q9HA82 394 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 ZSWIM6Q9HCJ5 1215 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 TUBE1Q9UJT0 475 aa11.02□□□□□ -0.65
CD40-203ENST00000461171 NAP1L2Q9ULW6 460 aaPredicted RBP11.02□□□□□ -0.65
CD40-203ENST00000461171 IGKV6D-21A0A0A0MT36 114 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.01□□□□□ -0.65
CD40-203ENST00000461171 LINC01553A4QN01 128 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 DHX15O43143 795 aaKnown RBP11.01□□□□□ -0.65
CD40-203ENST00000461171 ATG7O95352 703 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 AMHP03971 560 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 INSRRP14616 1297 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 IFNAR1P17181 557 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 PDIA3P30101 505 aaKnown RBP11.01□□□□□ -0.65
CD40-203ENST00000461171 ERVK-21P61565 698 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 MGAT3Q09327 533 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 GRB10Q13322 594 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 TOB2Q14106 344 aaPredicted RBP11.01□□□□□ -0.65
CD40-203ENST00000461171 CCDC85BQ15834 202 aaPredicted RBP11.01□□□□□ -0.65
CD40-203ENST00000461171 JAKMIP3Q5VZ66 844 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 REXO1Q8N1G1 1221 aaKnown RBP11.01□□□□□ -0.65
CD40-203ENST00000461171 CCDC12Q8WUD4 166 aaPredicted RBP11.01□□□□□ -0.65
CD40-203ENST00000461171 ATXN2LQ8WWM7 1075 aaKnown RBP11.01□□□□□ -0.65
CD40-203ENST00000461171 PPM1EQ8WY54 764 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 APBB2Q92870 758 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 PHKBQ93100 1093 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 SDF4Q9BRK5 362 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 ZBED2Q9BTP6 218 aa11.01□□□□□ -0.65
CD40-203ENST00000461171 RPLP2P05387 115 aaKnown RBP11□□□□□ -0.65
CD40-203ENST00000461171 LPIN1Q14693 890 aa11□□□□□ -0.65
CD40-203ENST00000461171 PLCB4Q15147 1175 aa11□□□□□ -0.65
CD40-203ENST00000461171 KRT40Q6A162 431 aa11□□□□□ -0.65
CD40-203ENST00000461171 MCTP2Q6DN12 878 aa11□□□□□ -0.65
CD40-203ENST00000461171 RUFY3Q7L099 469 aa11□□□□□ -0.65
CD40-203ENST00000461171 PLPPR4Q7Z2D5 763 aa11□□□□□ -0.65
CD40-203ENST00000461171 MYOCDQ8IZQ8 938 aa11□□□□□ -0.65
CD40-203ENST00000461171 TOP1MTQ969P6 601 aa11□□□□□ -0.65
CD40-203ENST00000461171 LENG9Q96B70 501 aa11□□□□□ -0.65
CD40-203ENST00000461171 IFIH1Q9BYX4 1025 aaKnown RBP11□□□□□ -0.65
CD40-203ENST00000461171 TM6SF1Q9BZW5 370 aa11□□□□□ -0.65
CD40-203ENST00000461171 AZI2Q9H6S1 392 aa11□□□□□ -0.65
CD40-203ENST00000461171 NCOA5Q9HCD5 579 aaKnown RBP11□□□□□ -0.65
CD40-203ENST00000461171 C6orf50Q9HD87 102 aa11□□□□□ -0.65
CD40-203ENST00000461171 RRN3P2A6NIE6 340 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 IPO5O00410 1097 aaKnown RBP10.99□□□□□ -0.65
CD40-203ENST00000461171 GTPBP6O43824 516 aaPredicted RBP10.99□□□□□ -0.65
CD40-203ENST00000461171 EDIL3O43854 480 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 PPFIA3O75145 1194 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 GHRP10912 638 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 GNA11P29992 359 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 CIITAP33076 1130 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 SLC26A2P50443 739 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 STAT5BP51692 787 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 MRPS6P82932 125 aaKnown RBP10.99□□□□□ -0.65
CD40-203ENST00000461171 SETQ01105 290 aaPredicted RBP10.99□□□□□ -0.65
CD40-203ENST00000461171 FBXO47Q5MNV8 452 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 FAM117BQ6P1L5 589 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 ABHD15Q6UXT9 468 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 PLA2G4DQ86XP0 818 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 CCDC60Q8IWA6 550 aaPredicted RBP10.99□□□□□ -0.65
CD40-203ENST00000461171 CCDC148Q8NFR7 591 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 RASGRP4Q8TDF6 673 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 GDPD5Q8WTR4 605 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 DNAJB3Q8WWF6 145 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 SYMPKQ92797 1274 aaKnown RBP10.99□□□□□ -0.65
CD40-203ENST00000461171 ZBTB10Q96DT7 871 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 ASB2Q96Q27 587 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 TGS1Q96RS0 853 aaKnown RBP10.99□□□□□ -0.65
CD40-203ENST00000461171 SUGCTQ9HAC7 445 aa10.99□□□□□ -0.65
CD40-203ENST00000461171 RC3H2Q9HBD1 1191 aaKnown RBP10.99□□□□□ -0.65
CD40-203ENST00000461171 TRPC6Q9Y210 931 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms