RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MYOM2P54296 1465 aa21.18■□□□□ 0.98
SNX27-204ENST00000458013 ZSCAN20P17040 1043 aaPredicted RBP21.18■□□□□ 0.98
SNX27-204ENST00000458013 OSBPP22059 807 aa21.18■□□□□ 0.98
SNX27-204ENST00000458013 ASPRV1Q53RT3 343 aa21.18■□□□□ 0.98
SNX27-204ENST00000458013 RNF168Q8IYW5 571 aaPredicted RBP21.18■□□□□ 0.98
SNX27-204ENST00000458013 SRP68Q9UHB9 627 aaKnown RBP21.18■□□□□ 0.98
SNX27-204ENST00000458013 RWDD2AQ9UIY3 292 aa21.18■□□□□ 0.98
SNX27-204ENST00000458013 NPR1P16066 1061 aa21.18■□□□□ 0.98
SNX27-204ENST00000458013 PZPP20742 1482 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 NCK2O43639 380 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 CYP2D6P10635 497 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 PEX3P56589 373 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 PDCD6IPQ8WUM4 868 aaKnown RBP21.17■□□□□ 0.98
SNX27-204ENST00000458013 PPP1R36Q96LQ0 422 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 LRRC4Q9HBW1 653 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 XDHP47989 1333 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 GOLGA8CPA6NN73 597 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 H3BRJ5 948 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 SERPING1P05155 500 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 PSMA2P25787 234 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 MECOMQ03112 1051 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 PPP2R5EQ16537 467 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 TRIM59Q8IWR1 403 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 PALMO75781 387 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 GFPT1Q06210 699 aaPredicted RBP21.17■□□□□ 0.98
SNX27-204ENST00000458013 KCNA1Q09470 495 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 PPP6R3Q5H9R7 873 aaPredicted RBP21.17■□□□□ 0.98
SNX27-204ENST00000458013 KIAA1841Q6NSI8 718 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 SAYSD1Q9NPB0 183 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 SUFUQ9UMX1 484 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 LOC102724428A0A0B4J2F2 783 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 SIK1P57059 783 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 LMNB2Q03252 620 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 FBXL13Q8NEE6 735 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 MSTO1Q9BUK6 570 aa21.17■□□□□ 0.98
SNX27-204ENST00000458013 NCLNQ969V3 563 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 GDAQ9Y2T3 454 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 SLC27A3Q5K4L6 730 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 ATP6V0A1Q93050 837 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 RUNDC3BQ96NL0 473 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 TTC7AQ9ULT0 858 aaPredicted RBP21.16■□□□□ 0.98
SNX27-204ENST00000458013 KIAA0232Q92628 1395 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 NMT2O60551 498 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 PMLP29590 882 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 OR6B3Q8NGW1 331 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 N4BP2L2Q92802 583 aaPredicted RBP21.16■□□□□ 0.98
SNX27-204ENST00000458013 DYDC2Q96IM9 177 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 GSDMAQ96QA5 445 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 MYCBPQ99417 103 aaPredicted RBP21.16■□□□□ 0.98
SNX27-204ENST00000458013 MIS12Q9H081 205 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 ZCWPW1Q9H0M4 648 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 TRAIPQ9BWF2 469 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 OCRLQ01968 901 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 CAPN11Q9UMQ6 739 aa21.16■□□□□ 0.98
SNX27-204ENST00000458013 HNRNPCL2B2RXH8 293 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 PIK3R2O00459 728 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 RASGRF2O14827 1237 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 HNRNPCL1O60812 293 aaKnown RBP21.15■□□□□ 0.98
SNX27-204ENST00000458013 BMP3P12645 472 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 GAP43P17677 238 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 EEF1DP29692 281 aaKnown RBP21.15■□□□□ 0.98
SNX27-204ENST00000458013 ERFP50548 548 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 SPATS2Q86XZ4 545 aaKnown RBP21.15■□□□□ 0.98
SNX27-204ENST00000458013 EPC1Q9H2F5 836 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 PHLPP2Q6ZVD8 1323 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 FGGP02679 453 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 LINC00301Q8NCQ3 95 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 PYROXD1Q8WU10 500 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 NUDCD1Q96RS6 583 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 FAM196BA6NMK8 535 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 NDUFA10O95299 355 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 BPIFB4P59827 614 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 UBE3CQ15386 1083 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 MB21D1Q8N884 522 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 ATF5Q9Y2D1 282 aaPredicted RBP21.15■□□□□ 0.98
SNX27-204ENST00000458013 NR1D1P20393 614 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 GRAMD1BQ3KR37 738 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 SH3RF3Q8TEJ3 882 aaPredicted RBP21.15■□□□□ 0.98
SNX27-204ENST00000458013 MED7O43513 233 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 PRR29P0C7W0 189 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 FAM47EQ6ZV65 393 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 SARS2Q9NP81 518 aaKnown RBP21.15■□□□□ 0.98
SNX27-204ENST00000458013 FAM8A1Q9UBU6 413 aa21.15■□□□□ 0.98
SNX27-204ENST00000458013 PDCD2Q16342 344 aaPredicted RBP21.14■□□□□ 0.98
SNX27-204ENST00000458013 FAM135BQ49AJ0 1406 aa21.14■□□□□ 0.98
SNX27-204ENST00000458013 ESRRAP11474 423 aaPredicted RBP21.14■□□□□ 0.98
SNX27-204ENST00000458013 DMTNQ08495 405 aa21.14■□□□□ 0.98
SNX27-204ENST00000458013 AP1ARQ63HQ0 302 aa21.14■□□□□ 0.98
SNX27-204ENST00000458013 KRT80Q6KB66 452 aa21.14■□□□□ 0.98
SNX27-204ENST00000458013 DSTYKQ6XUX3 929 aa21.14■□□□□ 0.98
SNX27-204ENST00000458013 CEP19Q96LK0 163 aa21.14■□□□□ 0.98
SNX27-204ENST00000458013 PACSIN2Q9UNF0 486 aaPredicted RBP21.14■□□□□ 0.98
SNX27-204ENST00000458013 NOC2LQ9Y3T9 749 aaKnown RBP21.14■□□□□ 0.98
SNX27-204ENST00000458013 ANXA13P27216 316 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 ZNF211Q13398 564 aaPredicted RBP21.14■□□□□ 0.97
SNX27-204ENST00000458013 FAM196AQ6ZSG2 479 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 RPF1Q9H9Y2 349 aaKnown RBP21.14■□□□□ 0.97
SNX27-204ENST00000458013 ZBED1O96006 694 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 THNSL1Q8IYQ7 743 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 FBXO41Q8TF61 875 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms