RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 HMGB1P1B2RPK0 211 aaPredicted RBP19.4■□□□□ 0.7
PTPN6-204ENST00000456013 KIF4AO95239 1232 aa19.4■□□□□ 0.7
PTPN6-204ENST00000456013 LSP1P33241 339 aa19.4■□□□□ 0.7
PTPN6-204ENST00000456013 PTK2Q05397 1052 aa19.4■□□□□ 0.7
PTPN6-204ENST00000456013 TRADDQ15628 312 aa19.4■□□□□ 0.7
PTPN6-204ENST00000456013 IFI16Q16666 785 aaKnown RBP19.4■□□□□ 0.7
PTPN6-204ENST00000456013 GPATCH4Q5T3I0 446 aaKnown RBP19.4■□□□□ 0.7
PTPN6-204ENST00000456013 EPN3Q9H201 632 aa19.4■□□□□ 0.7
PTPN6-204ENST00000456013 DAGLAQ9Y4D2 1042 aa19.4■□□□□ 0.7
PTPN6-204ENST00000456013 KCNK3O14649 394 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 NR2F2P24468 414 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 SLC12A3P55017 1021 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 ARSHQ5FYA8 562 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 ZNF571Q7Z3V5 609 aaPredicted RBP19.39■□□□□ 0.69
PTPN6-204ENST00000456013 FRMD5Q7Z6J6 570 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 KLHL7Q8IXQ5 586 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 ACTRT1Q8TDG2 376 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 RPGRQ92834 1020 aaKnown RBP19.39■□□□□ 0.69
PTPN6-204ENST00000456013 PAGR1Q9BTK6 254 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 KCNMB3Q9NPA1 279 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 CCNL1Q9UK58 526 aaPredicted RBP19.39■□□□□ 0.69
PTPN6-204ENST00000456013 INPP5BP32019 993 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 SUGP1Q8IWZ8 645 aaKnown RBP19.39■□□□□ 0.69
PTPN6-204ENST00000456013 TRAF3IP3Q9Y228 551 aa19.39■□□□□ 0.69
PTPN6-204ENST00000456013 ATP8B3O60423 1300 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 MYO3BQ8WXR4 1341 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 GREB1LQ9C091 1923 aaPredicted RBP19.38■□□□□ 0.69
PTPN6-204ENST00000456013 USP17L10C9JJH3 530 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 ACTN1P12814 892 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 UCHL3P15374 230 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 RFC4P35249 363 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 PICALMQ13492 652 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 CUL1Q13616 776 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 LRIG3Q6UXM1 1119 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 LRRC57Q8N9N7 239 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 CALR3Q96L12 384 aaKnown RBP19.38■□□□□ 0.69
PTPN6-204ENST00000456013 GLT8D2Q9H1C3 349 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 DHX36Q9H2U1 1008 aaKnown RBP19.38■□□□□ 0.69
PTPN6-204ENST00000456013 PLAAQ9Y263 795 aa19.38■□□□□ 0.69
PTPN6-204ENST00000456013 BHMG1C9JSJ3 638 aaPredicted RBP19.37■□□□□ 0.69
PTPN6-204ENST00000456013 MED24O75448 989 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 KRT18P05783 430 aaKnown RBP19.37■□□□□ 0.69
PTPN6-204ENST00000456013 SLC9A1P19634 815 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 SLC16A2P36021 539 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 ERVK-9P63128 1117 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 GUCY1A3Q02108 690 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 MMS22LQ6ZRQ5 1243 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 SPAG5Q96R06 1193 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 NAGPAQ9UK23 515 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 CYP3A7-CYP3A51PA0A087WV96 503 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 PPP1R37O75864 691 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 AFPP02771 609 aaKnown RBP19.37■□□□□ 0.69
PTPN6-204ENST00000456013 CYP3A7P24462 503 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 ECHS1P30084 290 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 PRKCIP41743 596 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 KAT2BQ92831 832 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 MBOAT7Q96N66 472 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 TMBIM4Q9HC24 238 aa19.37■□□□□ 0.69
PTPN6-204ENST00000456013 ARMCX3Q9UH62 379 aaPredicted RBP19.37■□□□□ 0.69
PTPN6-204ENST00000456013 SRRM3A6NNA2 597 aaPredicted RBP19.36■□□□□ 0.69
PTPN6-204ENST00000456013 ZBTB48P10074 688 aaPredicted RBP19.36■□□□□ 0.69
PTPN6-204ENST00000456013 ANXA13P27216 316 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 MDH1P40925 334 aaKnown RBP19.36■□□□□ 0.69
PTPN6-204ENST00000456013 ITGB3BPQ13352 177 aaPredicted RBP19.36■□□□□ 0.69
PTPN6-204ENST00000456013 PTGISQ16647 500 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 CEP85LQ5SZL2 805 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 CERKQ8TCT0 537 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 SERPINB13Q9UIV8 391 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 CEP104O60308 925 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 PON1P27169 355 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 CASP5P51878 434 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 GIT2Q14161 759 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 EXOC3L4Q17RC7 722 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 KNOP1Q1ED39 458 aaKnown RBP19.36■□□□□ 0.69
PTPN6-204ENST00000456013 ALKBH5Q6P6C2 394 aaKnown RBP19.36■□□□□ 0.69
PTPN6-204ENST00000456013 MAATS1Q7Z4T9 603 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 SLFN12Q8IYM2 578 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 ZHX3Q9H4I2 956 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 NENFQ9UMX5 172 aa19.36■□□□□ 0.69
PTPN6-204ENST00000456013 HLTFQ14527 1009 aaKnown RBP eCLIP19.35■□□□□ 0.69
PTPN6-204ENST00000456013 CRY2Q49AN0 593 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 TRAPPC3LQ5T215 181 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 NAA35Q5VZE5 725 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 PRR5LQ6MZQ0 368 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 EPM2AIP1Q7L775 607 aaPredicted RBP19.35■□□□□ 0.69
PTPN6-204ENST00000456013 LRRC45Q96CN5 670 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 UIMC1Q96RL1 719 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 DDX4Q9NQI0 724 aaKnown RBP19.35■□□□□ 0.69
PTPN6-204ENST00000456013 FBXL5Q9UKA1 691 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 USP17L15C9J2P7 530 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 USP17L13C9JLJ4 530 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 USP17L11C9JVI0 530 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 USP17L18D6R9N7 530 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 USP17L22D6RA61 530 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 USP17L17D6RBQ6 530 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 USP17L19D6RCP7 530 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 USP17L20D6RJB6 530 aa19.35■□□□□ 0.69
PTPN6-204ENST00000456013 PGRMC1O00264 195 aaKnown RBP19.35■□□□□ 0.69
PTPN6-204ENST00000456013 MEFVO15553 781 aaPredicted RBP19.35■□□□□ 0.69
PTPN6-204ENST00000456013 STAT3P40763 770 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms