RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 MAFGO15525 162 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 EFCAB14O75071 495 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 CCNE2O96020 404 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 FAM86B2P0C5J1 330 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 GHRP10912 638 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 IGBP1P78318 339 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 MGAT3Q09327 533 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 GRB10Q13322 594 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-204ENST00000455790 NTRK3Q16288 839 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 FAM26DQ5JW98 314 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 TEX2Q8IWB9 1127 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 RASGRP4Q8TDF6 673 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 TRAPPC12Q8WVT3 735 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 RAD9AQ99638 391 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 ZMYND12Q9H0C1 365 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 SMARCAD1Q9H4L7 1026 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 TUBE1Q9UJT0 475 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 IGLV3-22A0A075B6J6 115 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 ESYT2A0FGR8 921 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 PRPF3O43395 683 aaKnown RBP13.61□□□□□ -0.23
PDGFB-204ENST00000455790 AMHP03971 560 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 INSRRP14616 1297 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 PDIA3P30101 505 aaKnown RBP13.61□□□□□ -0.23
PDGFB-204ENST00000455790 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
PDGFB-204ENST00000455790 PLCB4Q15147 1175 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 TJAP1Q5JTD0 557 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 TAF2Q6P1X5 1199 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 DNAJB3Q8WWF6 145 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 SEPT8Q92599 483 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 SDF4Q9BRK5 362 aa13.61□□□□□ -0.23
PDGFB-204ENST00000455790 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
PDGFB-204ENST00000455790 POU3F3P20264 500 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-204ENST00000455790 PSMA5P28066 241 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 EVCP57679 992 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 HTRA4P83105 476 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-204ENST00000455790 TFF2Q03403 129 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 LPIN1Q14693 890 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 NIPA1Q7RTP0 329 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 RPAINQ86UA6 219 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 PLA2G4DQ86XP0 818 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
PDGFB-204ENST00000455790 C17orf80Q9BSJ5 609 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 SLC26A6Q9BXS9 759 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 IFIH1Q9BYX4 1025 aaKnown RBP13.6□□□□□ -0.23
PDGFB-204ENST00000455790 UPF3BQ9BZI7 483 aaKnown RBP13.6□□□□□ -0.23
PDGFB-204ENST00000455790 FAM49AQ9H0Q0 323 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-204ENST00000455790 GLT8D2Q9H1C3 349 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 AZI2Q9H6S1 392 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 VPS54Q9P1Q0 977 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
PDGFB-204ENST00000455790 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
PDGFB-204ENST00000455790 GTPBP6O43824 516 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-204ENST00000455790 ATG7O95352 703 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 NEFLP07196 543 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 CYP3A4P08684 503 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 IFNAR1P17181 557 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 ZNF76P36508 570 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 ERVK-21P61565 698 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 CCDC60Q8IWA6 550 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-204ENST00000455790 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-204ENST00000455790 ATXN2LQ8WWM7 1075 aaKnown RBP13.59□□□□□ -0.23
PDGFB-204ENST00000455790 ASB2Q96Q27 587 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 TGS1Q96RS0 853 aaKnown RBP13.59□□□□□ -0.23
PDGFB-204ENST00000455790 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-204ENST00000455790 SUGCTQ9HAC7 445 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 CDY2AQ9Y6F7 541 aa13.59□□□□□ -0.23
PDGFB-204ENST00000455790 IGKV6D-21A0A0A0MT36 114 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 IPO5O00410 1097 aaKnown RBP13.58□□□□□ -0.24
PDGFB-204ENST00000455790 EDIL3O43854 480 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 UPP2O95045 317 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 STAT5BP51692 787 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 MRPS6P82932 125 aaKnown RBP13.58□□□□□ -0.24
PDGFB-204ENST00000455790 TMEM62Q0P6H9 643 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 SKIV2LQ15477 1246 aaKnown RBP13.58□□□□□ -0.24
PDGFB-204ENST00000455790 FBXO47Q5MNV8 452 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 PLPPR4Q7Z2D5 763 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 CCDC12Q8WUD4 166 aaPredicted RBP13.58□□□□□ -0.24
PDGFB-204ENST00000455790 LINC01599Q8WXQ3 324 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 TOP1MTQ969P6 601 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 LENG9Q96B70 501 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 AGO3Q9H9G7 860 aaKnown RBP13.58□□□□□ -0.24
PDGFB-204ENST00000455790 INSL6Q9Y581 213 aa13.58□□□□□ -0.24
PDGFB-204ENST00000455790 COL4A6Q14031 1691 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 POTEB3A0JP26 581 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 BACH1O14867 736 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 MRPS5P82675 430 aaKnown RBP13.57□□□□□ -0.24
PDGFB-204ENST00000455790 AKAP17AQ02040 695 aaKnown RBP13.57□□□□□ -0.24
PDGFB-204ENST00000455790 PRR16Q569H4 304 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 POTEBQ6S5H4 581 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 RSPH3Q86UC2 560 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 APBB2Q92870 758 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 AIFM3Q96NN9 605 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 YME1L1Q96TA2 773 aa13.57□□□□□ -0.24
PDGFB-204ENST00000455790 ZNF577Q9BSK1 485 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms